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    CPNE4 copine 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 719231, updated on 17-Aug-2024

    Summary

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    Official Symbol
    CPNE4provided by VGNC
    Official Full Name
    copine 4provided by VGNC
    Primary source
    VGNC:VGNC:71466
    Locus tag
    EGK_12106
    See related
    Ensembl:ENSMMUG00000003277
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    copine-4
    Orthologs
    human mouse all
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    Genomic context

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    See CPNE4 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (33823670..34333256, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (169915370..170419965)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene nudix hydrolase 16 Neighboring gene small nucleolar RNA SNORA58 Neighboring gene mitochondrial ribosomal protein L3 Neighboring gene 26S proteasome regulatory subunit 7 pseudogene Neighboring gene transfer RNA cysteine (anticodon GCA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    copine-4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      33823670..34333256 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028843706.1 → XP_028699539.1  copine-4 isoform X3

      UniProtKB/TrEMBL
      F7FKI4
      Conserved Domains (3) summary
      cd04047
      Location:173 → 285
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:42 → 158
      C2A_Copine; C2 domain first repeat in Copine
      cl00057
      Location:344 → 482
      vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...

    2. XM_028843704.1 → XP_028699537.1  copine-4 isoform X1

      UniProtKB/TrEMBL
      A0A1D5QTY2, F7FKI4
      Related
      ENSMMUP00000051512.2, ENSMMUT00000063316.2
      Conserved Domains (3) summary
      cd04047
      Location:173 → 285
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:42 → 158
      C2A_Copine; C2 domain first repeat in Copine
      pfam07002
      Location:344 → 561
      Copine

    3. XM_015132141.2 → XP_014987627.1  copine-4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QCE1, A0A8J8YFA1, F7FKI4, G7MJS2
      Related
      ENSMMUP00000045710.1, ENSMMUT00000065277.2
      Conserved Domains (3) summary
      cd04047
      Location:155 → 267
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:24 → 140
      C2A_Copine; C2 domain first repeat in Copine
      pfam07002
      Location:326 → 543
      Copine

    4. XM_028843705.1 → XP_028699538.1  copine-4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QCE1, A0A8J8YFA1, F7FKI4, G7MJS2
      Related
      ENSMMUP00000004369.4, ENSMMUT00000004635.4
      Conserved Domains (3) summary
      cd04047
      Location:155 → 267
      C2B_Copine; C2 domain second repeat in Copine
      cd04048
      Location:24 → 140
      C2A_Copine; C2 domain first repeat in Copine
      pfam07002
      Location:326 → 543
      Copine
    Nucleotide Protein
    Heading Accession and Version

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