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    BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 705283, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BDP1provided by VGNC
    Official Full Name
    B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIBprovided by VGNC
    Primary source
    VGNC:VGNC:70066
    See related
    Ensembl:ENSMMUG00000009057
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See BDP1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (68282253..68397049)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (67958119..68073233)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene small EDRK-rich factor 1A Neighboring gene non-specific lipid-transfer protein-like Neighboring gene methylcrotonyl-CoA carboxylase subunit 2 Neighboring gene CART prepropeptide

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables TFIIIC-class transcription factor complex binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA polymerase III preinitiation complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIIIB complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor TFIIIB component B'' homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      68282253..68397049
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140253.2 → XP_014995739.2  transcription factor TFIIIB component B'' homolog isoform X1

      UniProtKB/TrEMBL
      G7MU89
      Conserved Domains (5) summary
      PTZ00121
      Location:378 → 1209
      PTZ00121; MAEBL; Provisional
      PHA03307
      Location:15 → 144
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5118
      Location:81 → 388
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      TIGR00927
      Location:950 → 1235
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam15963
      Location:297 → 380
      Myb_DNA-bind_7; Myb DNA-binding like

    2. XM_002804409.3 → XP_002804455.3  transcription factor TFIIIB component B'' homolog isoform X3

      UniProtKB/TrEMBL
      G7MU89
      Conserved Domains (5) summary
      PTZ00121
      Location:378 → 1209
      PTZ00121; MAEBL; Provisional
      PHA03307
      Location:15 → 144
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5118
      Location:81 → 388
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      TIGR00927
      Location:950 → 1235
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam15963
      Location:297 → 380
      Myb_DNA-bind_7; Myb DNA-binding like

    3. XM_015140255.2 → XP_014995741.2  transcription factor TFIIIB component B'' homolog isoform X4

      UniProtKB/TrEMBL
      G7MU89
      Conserved Domains (5) summary
      PTZ00121
      Location:378 → 1209
      PTZ00121; MAEBL; Provisional
      PHA03307
      Location:15 → 144
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5118
      Location:81 → 388
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      TIGR00927
      Location:950 → 1235
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam15963
      Location:297 → 380
      Myb_DNA-bind_7; Myb DNA-binding like

    4. XM_015140254.2 → XP_014995740.2  transcription factor TFIIIB component B'' homolog isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZLM7, G7MU89
      Related
      ENSMMUP00000065519.1, ENSMMUT00000102641.1
      Conserved Domains (5) summary
      PTZ00121
      Location:378 → 1209
      PTZ00121; MAEBL; Provisional
      PHA03307
      Location:15 → 144
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5118
      Location:81 → 388
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      TIGR00927
      Location:950 → 1235
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam15963
      Location:297 → 380
      Myb_DNA-bind_7; Myb DNA-binding like

    5. XM_028849497.1 → XP_028705330.1  transcription factor TFIIIB component B'' homolog isoform X5

      UniProtKB/TrEMBL
      F6SQX7
      Related
      ENSMMUP00000013317.4, ENSMMUT00000014219.4
      Conserved Domains (5) summary
      PTZ00121
      Location:378 → 1209
      PTZ00121; MAEBL; Provisional
      PHA03307
      Location:15 → 144
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5118
      Location:81 → 388
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      TIGR00927
      Location:950 → 1235
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam15963
      Location:297 → 380
      Myb_DNA-bind_7; Myb DNA-binding like

    6. XM_028849498.1 → XP_028705331.1  transcription factor TFIIIB component B'' homolog isoform X6

      UniProtKB/TrEMBL
      F6SQX7
      Conserved Domains (5) summary
      PTZ00121
      Location:378 → 1209
      PTZ00121; MAEBL; Provisional
      PHA03307
      Location:15 → 144
      PHA03307; transcriptional regulator ICP4; Provisional
      COG5118
      Location:81 → 388
      BDP1; Transcription initiation factor TFIIIB, Bdp1 subunit [Transcription]
      TIGR00927
      Location:950 → 1235
      2A1904; K+-dependent Na+/Ca+ exchanger
      pfam15963
      Location:297 → 380
      Myb_DNA-bind_7; Myb DNA-binding like

    7. XM_028849499.1 → XP_028705332.1  transcription factor TFIIIB component B'' homolog isoform X7

      UniProtKB/TrEMBL
      G7MU89
      Conserved Domains (1) summary
      TIGR00927
      Location:530 → 815
      2A1904; K+-dependent Na+/Ca+ exchanger

    RNA

    1. XR_001445341.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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