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    TAF2 TATA-box binding protein associated factor 2 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 702411, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TAF2provided by VGNC
    Official Full Name
    TATA-box binding protein associated factor 2provided by VGNC
    Primary source
    VGNC:VGNC:78090
    See related
    Ensembl:ENSMMUG00000014702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TAF2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (119995606..120101760, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (118916867..119026040, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106999915 Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 2 Neighboring gene small nucleolar RNA SNORD55/SNORD39 Neighboring gene DNA replication and sister chromatid cohesion 1 Neighboring gene DEP domain containing MTOR interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase II promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription factor TFIID complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription initiation factor TFIID subunit 2
    Names
    TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266380.1 → NP_001253309.1  transcription initiation factor TFIID subunit 2

      See identical proteins and their annotated locations for NP_001253309.1

      Status: PROVISIONAL

      Source sequence(s)
      JV043516
      UniProtKB/TrEMBL
      F7GSG2, H9EU57, H9Z254
      Related
      ENSMMUP00000019292.4, ENSMMUT00000020618.4
      Conserved Domains (1) summary
      cd09839
      Location:28 → 523
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      119995606..120101760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852191.1 → XP_028708024.1  transcription initiation factor TFIID subunit 2 isoform X3

      UniProtKB/TrEMBL
      H9Z254
      Conserved Domains (1) summary
      cd09839
      Location:2 → 354
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2

    2. XM_028852193.1 → XP_028708026.1  transcription initiation factor TFIID subunit 2 isoform X3

      UniProtKB/TrEMBL
      H9Z254
      Conserved Domains (1) summary
      cd09839
      Location:2 → 354
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2

    3. XM_028852195.1 → XP_028708028.1  transcription initiation factor TFIID subunit 2 isoform X4

      UniProtKB/TrEMBL
      H9Z254
      Conserved Domains (1) summary
      cd09839
      Location:1 → 312
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2

    4. XM_028852190.1 → XP_028708023.1  transcription initiation factor TFIID subunit 2 isoform X2

      UniProtKB/TrEMBL
      H9Z254
      Conserved Domains (1) summary
      cd09839
      Location:28 → 523
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2

    5. XM_028852189.1 → XP_028708022.1  transcription initiation factor TFIID subunit 2 isoform X1

      UniProtKB/TrEMBL
      F7GSG6, H9Z254
      Related
      ENSMMUP00000019290.3, ENSMMUT00000020616.4
      Conserved Domains (1) summary
      cd09839
      Location:28 → 523
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2

    6. XM_028852194.1 → XP_028708027.1  transcription initiation factor TFIID subunit 2 isoform X3

      UniProtKB/TrEMBL
      H9Z254
      Conserved Domains (1) summary
      cd09839
      Location:2 → 354
      M1_like_TAF2; TATA binding protein (TBP) associated factor 2
    Nucleotide Protein
    Heading Accession and Version

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