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    APOC4 apolipoprotein C4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 718319, updated on 17-Aug-2024

    Summary

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    Official Symbol
    APOC4provided by VGNC
    Official Full Name
    apolipoprotein C4provided by VGNC
    Primary source
    VGNC:VGNC:109594
    See related
    Ensembl:ENSMMUG00000002471
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See APOC4 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (44981070..44984682)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein C1 Neighboring gene apolipoprotein C-I, acidic form Neighboring gene apolipoprotein C2 Neighboring gene CLPTM1 regulator of GABA type A receptor forward trafficking

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041772.1 Chromosome 19 Reference Mmul_10 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Macaca mulatta transcriptome and the sequence divergence between Macaca and human. Magness CL, et al. Genome Biol, 2005. PMID 15998449, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of sequestering of triglyceride IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in triglyceride homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of high-density lipoprotein particle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of very-low-density lipoprotein particle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    apolipoprotein C-IV
    Names
    apolipoprotein C-II

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195137.1 → NP_001182066.1  apolipoprotein C-IV precursor

      Status: VALIDATED

      Source sequence(s)
      CO646055
      UniProtKB/TrEMBL
      A0A5F8A7J9
      Related
      ENSMMUP00000072889.1, ENSMMUT00000085192.1
      Conserved Domains (1) summary
      pfam15119
      Location:33 → 124
      APOC4; Apolipoprotein C4

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      44981070..44984682
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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