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    RANBP10 RAN binding protein 10 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 700911, updated on 17-Aug-2024

    Summary

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    Official Symbol
    RANBP10provided by VGNC
    Official Full Name
    RAN binding protein 10provided by VGNC
    Primary source
    VGNC:VGNC:76563
    See related
    Ensembl:ENSMMUG00000007804
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See RANBP10 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 20 NC_041773.1 (54932753..55017649, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 20 NC_027912.1 (52072380..52157281, complement)

    Chromosome 20 - NC_041773.1Genomic Context describing neighboring genes Neighboring gene chromosome 20 C16orf86 homolog Neighboring gene enkurin domain containing 1 Neighboring gene Gfo/Idh/MocA-like oxidoreductase domain containing 2 Neighboring gene translin associated factor X interacting protein 1 Neighboring gene centromere protein T

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ran-binding protein 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266835.1 → NP_001253764.1  ran-binding protein 10

      See identical proteins and their annotated locations for NP_001253764.1

      Status: PROVISIONAL

      Source sequence(s)
      JV635468
      UniProtKB/TrEMBL
      A0A1D5Q295, F7CPP8, G7NQ67, I2CV23
      Related
      ENSMMUP00000042157.2, ENSMMUT00000067197.2
      Conserved Domains (5) summary
      smart00667
      Location:257 → 284
      LisH; Lissencephaly type-1-like homology motif
      smart00668
      Location:291 → 347
      CTLH; C-terminal to LisH motif
      smart00757
      Location:507 → 604
      CRA; CT11-RanBPM
      pfam10607
      Location:291 → 345
      CLTH; CTLH/CRA C-terminal to LisH motif domain
      cd12909
      Location:77 → 219
      SPRY_RanBP9_10; SPRY domain in Ran binding proteins 9 and 10

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041773.1 Reference Mmul_10 Primary Assembly

      Range
      54932753..55017649 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028840432.1 → XP_028696265.1  ran-binding protein 10 isoform X1

      Conserved Domains (4) summary
      smart00667
      Location:73 → 100
      LisH; Lissencephaly type-1-like homology motif
      smart00668
      Location:107 → 163
      CTLH; C-terminal to LisH motif
      smart00757
      Location:323 → 420
      CRA; CT11-RanBPM
      cl02614
      Location:15 → 35
      SPRY; SPRY domain

    2. XM_028840431.1 → XP_028696264.1  ran-binding protein 10 isoform X1

      Conserved Domains (4) summary
      smart00667
      Location:73 → 100
      LisH; Lissencephaly type-1-like homology motif
      smart00668
      Location:107 → 163
      CTLH; C-terminal to LisH motif
      smart00757
      Location:323 → 420
      CRA; CT11-RanBPM
      cl02614
      Location:15 → 35
      SPRY; SPRY domain

    3. XM_028840433.1 → XP_028696266.1  ran-binding protein 10 isoform X2

      Conserved Domains (3) summary
      smart00667
      Location:28 → 55
      LisH; Lissencephaly type-1-like homology motif
      smart00757
      Location:278 → 375
      CRA; CT11-RanBPM
      pfam10607
      Location:62 → 116
      CLTH; CTLH/CRA C-terminal to LisH motif domain

    4. XM_028840434.1 → XP_028696267.1  ran-binding protein 10 isoform X2

      Conserved Domains (3) summary
      smart00667
      Location:28 → 55
      LisH; Lissencephaly type-1-like homology motif
      smart00757
      Location:278 → 375
      CRA; CT11-RanBPM
      pfam10607
      Location:62 → 116
      CLTH; CTLH/CRA C-terminal to LisH motif domain

    5. XM_028840435.1 → XP_028696268.1  ran-binding protein 10 isoform X2

      Conserved Domains (3) summary
      smart00667
      Location:28 → 55
      LisH; Lissencephaly type-1-like homology motif
      smart00757
      Location:278 → 375
      CRA; CT11-RanBPM
      pfam10607
      Location:62 → 116
      CLTH; CTLH/CRA C-terminal to LisH motif domain
    Nucleotide Protein
    Heading Accession and Version

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