U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CPEB3 cytoplasmic polyadenylation element binding protein 3 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 698133, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CPEB3provided by VGNC
    Official Full Name
    cytoplasmic polyadenylation element binding protein 3provided by VGNC
    Primary source
    VGNC:VGNC:71449
    See related
    Ensembl:ENSMMUG00000015050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CPEB3 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 9 NC_041762.1 (92213276..92459836, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 9 NC_027901.1 (87271634..87517871, complement)

    Chromosome 9 - NC_041762.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor binding protein 3 Neighboring gene B-TFIID TATA-box binding protein associated factor 1 Neighboring gene succinate dehydrogenase cytochrome b560 subunit, mitochondrial pseudogene Neighboring gene eukaryotic initiation factor 4A-I-like Neighboring gene membrane associated ring-CH-type finger 5 Neighboring gene uncharacterized LOC107000223 Neighboring gene insulin degrading enzyme

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA 3'-UTR binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA regulatory element binding translation repressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ribosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation factor activity, RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytoplasmic polyadenylation element-binding protein 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041762.1 Reference Mmul_10 Primary Assembly

      Range
      92213276..92459836 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028826658.1 → XP_028682491.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAX4
      Conserved Domains (3) summary
      cd12724
      Location:461 → 552
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:569 → 649
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:644 → 705
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    2. XM_015147694.2 → XP_015003180.2  cytoplasmic polyadenylation element-binding protein 3 isoform X5

      UniProtKB/TrEMBL
      F6TL27
      Related
      ENSMMUP00000019726.4, ENSMMUT00000021096.4
      Conserved Domains (3) summary
      cd12724
      Location:411 → 502
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:519 → 599
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:594 → 655
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    3. XM_002805760.3 → XP_002805806.3  cytoplasmic polyadenylation element-binding protein 3 isoform X4

      UniProtKB/TrEMBL
      F6TL27
      Related
      ENSMMUP00000080853.1, ENSMMUT00000090427.1
      Conserved Domains (3) summary
      cd12724
      Location:430 → 521
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:538 → 618
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:613 → 674
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    4. XM_015147693.2 → XP_015003179.2  cytoplasmic polyadenylation element-binding protein 3 isoform X3

      UniProtKB/TrEMBL
      A0A1D5RAX4
      Conserved Domains (3) summary
      cd12724
      Location:438 → 529
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:546 → 626
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:621 → 682
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    5. XM_015147688.2 → XP_015003174.2  cytoplasmic polyadenylation element-binding protein 3 isoform X2

      UniProtKB/TrEMBL
      A0A1D5R3E7
      Related
      ENSMMUP00000054833.2, ENSMMUT00000056470.2
      Conserved Domains (3) summary
      cd12724
      Location:453 → 544
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:561 → 641
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:636 → 697
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    6. XM_015147687.2 → XP_015003173.2  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAX4
      Conserved Domains (3) summary
      cd12724
      Location:461 → 552
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:569 → 649
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:644 → 705
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    7. XM_015147689.2 → XP_015003175.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAX4
      Conserved Domains (3) summary
      cd12724
      Location:461 → 552
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:569 → 649
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:644 → 705
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    8. XM_015147692.2 → XP_015003178.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAX4
      Conserved Domains (3) summary
      cd12724
      Location:461 → 552
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:569 → 649
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:644 → 705
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain

    9. XM_015147691.2 → XP_015003177.1  cytoplasmic polyadenylation element-binding protein 3 isoform X1

      UniProtKB/TrEMBL
      A0A1D5RAX4
      Related
      ENSMMUP00000057465.2, ENSMMUT00000058829.2
      Conserved Domains (3) summary
      cd12724
      Location:461 → 552
      RRM1_CPEB2_like; RNA recognition motif 1 in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      cd12726
      Location:569 → 649
      RRM2_CPEB2_like; RNA recognition motif 2 found in cytoplasmic polyadenylation element-binding protein CPEB-2, CPEB-3, CPEB-4 and similar protiens
      pfam16366
      Location:644 → 705
      CEBP_ZZ; Cytoplasmic polyadenylation element-binding protein ZZ domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.