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    DDX46 DEAD-box helicase 46 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711026, updated on 17-Aug-2024

    Summary

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    Official Symbol
    DDX46provided by VGNC
    Official Full Name
    DEAD-box helicase 46provided by VGNC
    Primary source
    VGNC:VGNC:71663
    See related
    Ensembl:ENSMMUG00000012463
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See DDX46 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (132220329..132297509)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (132472302..132550386)

    Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene SEC24 homolog A, COPII coat complex component Neighboring gene U6 spliceosomal RNA Neighboring gene calcium modulating ligand Neighboring gene chromosome 6 C5orf24 homolog Neighboring gene thioredoxin domain containing 15

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    probable ATP-dependent RNA helicase DDX46
    Names
    putative ATP-dependent RNA helicase DDX46
    NP_001248109.1
    XP_014996346.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001261180.1 → NP_001248109.1  probable ATP-dependent RNA helicase DDX46

      See identical proteins and their annotated locations for NP_001248109.1

      Status: PROVISIONAL

      Source sequence(s)
      JV048852
      UniProtKB/TrEMBL
      F7C3B9, G7MUD1, H9G2L2
      Related
      ENSMMUP00000034116.3, ENSMMUT00000041083.3
      Conserved Domains (3) summary
      COG0513
      Location:344 → 826
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17953
      Location:361 → 582
      DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46
      cd22473
      Location:929 → 1031
      KH-I_DDX46; type I K homology (KH) RNA-binding domain found in DEAD box protein 46 (DDX46) and similar proteins

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041759.1 Reference Mmul_10 Primary Assembly

      Range
      132220329..132297509
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015140860.2 → XP_014996346.1  probable ATP-dependent RNA helicase DDX46 isoform X1

      UniProtKB/TrEMBL
      G7MUD1
      Conserved Domains (3) summary
      COG0513
      Location:344 → 826
      SrmB; Superfamily II DNA and RNA helicase [Replication, recombination and repair]
      cd17953
      Location:361 → 582
      DEADc_DDX46; DEAD-box helicase domain of DEAD box protein 46
      cd22473
      Location:928 → 1030
      KH-I_DDX46; type I K homology (KH) RNA-binding domain found in DEAD box protein 46 (DDX46) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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