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    SLC35C1 solute carrier family 35 member C1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 715064, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC35C1provided by VGNC
    Official Full Name
    solute carrier family 35 member C1provided by VGNC
    Primary source
    VGNC:VGNC:77524
    Locus tag
    EGK_06320
    See related
    Ensembl:ENSMMUG00000002452
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See SLC35C1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (19963422..19971880, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (20243144..20253024, complement)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene Frey regulator of sperm-oocyte fusion 1 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene uncharacterized LOC106993241 Neighboring gene uncharacterized LOC114672268

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GDP-fucose import into Golgi lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein O-linked fucosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDP-fucose transporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001258150.1 → NP_001245079.1  GDP-fucose transporter 1

      See identical proteins and their annotated locations for NP_001245079.1

      Status: PROVISIONAL

      Source sequence(s)
      JU476279
      UniProtKB/TrEMBL
      A0A8J8Y415, F7HH07, G7NDI1, H9EWX0
      Related
      ENSMMUP00000065546.1, ENSMMUT00000097643.1
      Conserved Domains (1) summary
      cl23754
      Location:42 → 183
      EamA; EamA-like transporter family

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      19963422..19971880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114236.2 → XP_014969722.1  GDP-fucose transporter 1 isoform X2

      UniProtKB/TrEMBL
      F6T786, H9EWX0
      Related
      ENSMMUP00000037115.1, ENSMMUT00000044109.3
      Conserved Domains (1) summary
      cl26744
      Location:26 → 290
      TPT; Triose-phosphate Transporter family

    2. XM_015114234.2 → XP_014969720.1  GDP-fucose transporter 1 isoform X2

      UniProtKB/TrEMBL
      F6T786, H9EWX0
      Conserved Domains (1) summary
      cl26744
      Location:26 → 290
      TPT; Triose-phosphate Transporter family

    3. XM_028832762.1 → XP_028688595.1  GDP-fucose transporter 1 isoform X1

      UniProtKB/TrEMBL
      H9EWX0
      Conserved Domains (1) summary
      cl26744
      Location:41 → 305
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version

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