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    EOMES eomesodermin [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 704711, updated on 17-Aug-2024

    Summary

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    Official Symbol
    EOMESprovided by VGNC
    Official Full Name
    eomesoderminprovided by VGNC
    Primary source
    VGNC:VGNC:110368
    See related
    Ensembl:ENSMMUG00000064030
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See EOMES in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (20018480..20025222)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (184450408..184457148, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106997141 Neighboring gene uncharacterized LOC106997147 Neighboring gene uncharacterized protein KIAA1143 pseudogene Neighboring gene 40S ribosomal protein S27-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CD8-positive, alpha-beta T cell differentiation involved in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endodermal cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mesoderm formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eomesodermin homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      20018480..20025222
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015132320.2 → XP_014987806.2  eomesodermin homolog isoform X1

      UniProtKB/TrEMBL
      A0A5F8A4F4
      Related
      ENSMMUP00000072238.1, ENSMMUT00000089758.1
      Conserved Domains (2) summary
      pfam00907
      Location:267 → 454
      T-box
      pfam16176
      Location:480 → 701
      T-box_assoc; T-box transcription factor-associated

    2. XM_015132321.2 → XP_014987807.2  eomesodermin homolog isoform X2

      Conserved Domains (2) summary
      pfam00907
      Location:267 → 454
      T-box
      pfam16176
      Location:461 → 682
      T-box_assoc; T-box transcription factor-associated
    Nucleotide Protein
    Heading Accession and Version

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