U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    APOD apolipoprotein D [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 709223, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    APODprovided by VGNC
    Official Full Name
    apolipoprotein Dprovided by VGNC
    Primary source
    VGNC:VGNC:69988
    Locus tag
    EGK_12242
    See related
    Ensembl:ENSMMUG00000063008
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See APOD in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (2403317..2415004)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (202370411..202382266, complement)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxybutyrate dehydrogenase 1 Neighboring gene U1 small nuclear ribonucleoprotein C-like Neighboring gene uncharacterized LOC114676120 Neighboring gene uncharacterized LOC106997195 Neighboring gene 60S ribosomal protein L24 pseudogene Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 2 Neighboring gene U6atac minor spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cholesterol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in brain development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tissue regeneration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    apolipoprotein D

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      2403317..2415004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001098104.4 → XP_001098104.2  apolipoprotein D isoform X1

      See identical proteins and their annotated locations for XP_001098104.2

      Conserved Domains (1) summary
      cl21528
      Location:84 → 229
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family

    2. XM_015132547.2 → XP_014988033.1  apolipoprotein D isoform X2

      UniProtKB/TrEMBL
      A0A5F7ZCW1, A0A8J8YFT1, F7FST1
      Related
      ENSMMUP00000062473.1, ENSMMUT00000093050.1
      Conserved Domains (1) summary
      cl21528
      Location:37 → 182
      Lipocalin; Lipocalin / cytosolic fatty-acid binding protein family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.