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    TRAM1 translocation associated membrane protein 1 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 693963, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TRAM1provided by VGNC
    Official Full Name
    translocation associated membrane protein 1provided by VGNC
    Primary source
    VGNC:VGNC:84131
    See related
    Ensembl:ENSMMUG00000001516
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TRAM1 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 8 NC_041761.1 (71163675..71196718, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 8 NC_027900.1 (68800026..68833002, complement)

    Chromosome 8 - NC_041761.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor coactivator 2 Neighboring gene transcription factor BTF3 pseudogene Neighboring gene 60S ribosomal protein L13 pseudogene Neighboring gene small nucleolar RNA U13 Neighboring gene lactamase beta 2 Neighboring gene XK related 9

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein insertion into ER membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translocating chain-associated membrane protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001266375.1 → NP_001253304.1  translocating chain-associated membrane protein 1

      See identical proteins and their annotated locations for NP_001253304.1

      Status: PROVISIONAL

      Source sequence(s)
      JV045469
      UniProtKB/TrEMBL
      F7GCV4
      Related
      ENSMMUP00000002015.2, ENSMMUT00000002133.4
      Conserved Domains (2) summary
      smart00724
      Location:117 → 326
      TLC; TRAM, LAG1 and CLN8 homology domains
      pfam08390
      Location:50 → 115
      TRAM1; TRAM1-like protein

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041761.1 Reference Mmul_10 Primary Assembly

      Range
      71163675..71196718 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028852116.1 → XP_028707949.1  translocating chain-associated membrane protein 1 isoform X1

      Conserved Domains (1) summary
      smart00724
      Location:31 → 240
      TLC; TRAM, LAG1 and CLN8 homology domains
    Nucleotide Protein
    Heading Accession and Version

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