U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CKAP5 cytoskeleton associated protein 5 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 714095, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CKAP5provided by VGNC
    Official Full Name
    cytoskeleton associated protein 5provided by VGNC
    Primary source
    VGNC:VGNC:71368
    See related
    Ensembl:ENSMMUG00000003631
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CKAP5 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    47
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 14 NC_041767.1 (18916792..19017889)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 14 NC_027906.1 (19185106..19288693)

    Chromosome 14 - NC_041767.1Genomic Context describing neighboring genes Neighboring gene centriolar satellite-associated tubulin polyglutamylase complex regulator 1 Neighboring gene ATPase Asna1 pseudogene Neighboring gene LDL receptor related protein 4 Neighboring gene small nucleolar RNA SNORD67 Neighboring gene coagulation factor II, thrombin Neighboring gene zinc finger protein 408

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule plus end polymerase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule plus-end binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in centrosome duplication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of microtubule cytoskeleton polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule polymerization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule plus-end IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle pole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    cytoskeleton-associated protein 5
    Names
    colonic and hepatic tumor over-expressed protein
    cytoskeleton-associated protein 5-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041767.1 Reference Mmul_10 Primary Assembly

      Range
      18916792..19017889
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015114356.2 → XP_014969842.1  cytoskeleton-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      G7NDG7
      Conserved Domains (1) summary
      pfam12348
      Location:856 → 1048
      CLASP_N; CLASP N terminal

    2. XM_015114361.2 → XP_014969847.1  cytoskeleton-associated protein 5 isoform X2

      UniProtKB/TrEMBL
      G7NDG7, H9Z1V0
      Related
      ENSMMUP00000051454.1, ENSMMUT00000063672.2
      Conserved Domains (1) summary
      pfam12348
      Location:856 → 1048
      CLASP_N; CLASP N terminal

    3. XM_015114362.2 → XP_014969848.1  cytoskeleton-associated protein 5 isoform X3

      UniProtKB/TrEMBL
      G7NDG7
      Conserved Domains (1) summary
      pfam12348
      Location:856 → 1048
      CLASP_N; CLASP N terminal

    4. XM_015114359.2 → XP_014969845.1  cytoskeleton-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      G7NDG7
      Conserved Domains (1) summary
      pfam12348
      Location:856 → 1048
      CLASP_N; CLASP N terminal

    5. XM_015114358.2 → XP_014969844.1  cytoskeleton-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      G7NDG7
      Conserved Domains (1) summary
      pfam12348
      Location:856 → 1048
      CLASP_N; CLASP N terminal

    6. XM_015114357.2 → XP_014969843.1  cytoskeleton-associated protein 5 isoform X1

      UniProtKB/TrEMBL
      G7NDG7
      Conserved Domains (1) summary
      pfam12348
      Location:856 → 1048
      CLASP_N; CLASP N terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials