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    ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 574267, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ERCC1provided by VGNC
    Official Full Name
    ERCC excision repair 1, endonuclease non-catalytic subunitprovided by VGNC
    Primary source
    VGNC:VGNC:72422
    See related
    Ensembl:ENSMMUG00000000718
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See ERCC1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (45458750..45479577, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (40726955..40747592, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene kinesin light chain 3 Neighboring gene ERCC excision repair 2, TFIIH core complex helicase subunit Neighboring gene protein phosphatase 1 regulatory subunit 13 like Neighboring gene RNA polymerase I subunit G Neighboring gene FosB proto-oncogene, AP-1 transcription factor subunit Neighboring gene reticulon 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Elevated gene expression levels distinguish human from non-human primate brains. Cáceres M, et al. Proc Natl Acad Sci U S A, 2003 Oct 28. PMID 14557539, Free PMC Article
    2. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables single-stranded DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in UV-damage excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in meiotic mismatch repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ERCC4-ERCC1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nucleotide-excision repair factor 1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA excision repair protein ERCC-1
    Names
    excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence)
    excision repair protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      45458750..45479577 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015124277.2 → XP_014979763.1  DNA excision repair protein ERCC-1 isoform X6

      Conserved Domains (2) summary
      pfam03834
      Location:36 → 141
      Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
      pfam14520
      Location:167 → 219
      HHH_5; Helix-hairpin-helix domain

    2. XM_015124275.2 → XP_014979761.1  DNA excision repair protein ERCC-1 isoform X4

      UniProtKB/TrEMBL
      Q6UIQ4
      Conserved Domains (2) summary
      pfam00633
      Location:236 → 263
      HHH; Helix-hairpin-helix motif
      pfam03834
      Location:100 → 213
      Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)

    3. XM_015124273.2 → XP_014979759.1  DNA excision repair protein ERCC-1 isoform X3

      UniProtKB/TrEMBL
      A0A1D5R0S5, F6YL08
      Related
      ENSMMUP00000000972.4, ENSMMUT00000001035.4
      Conserved Domains (2) summary
      pfam03834
      Location:100 → 213
      Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
      pfam14520
      Location:239 → 291
      HHH_5; Helix-hairpin-helix domain

    4. XM_015124276.2 → XP_014979762.1  DNA excision repair protein ERCC-1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5Q9B1
      Conserved Domains (2) summary
      pfam03834
      Location:36 → 141
      Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
      pfam14520
      Location:167 → 213
      HHH_5; Helix-hairpin-helix domain

    5. XM_015124271.2 → XP_014979757.1  DNA excision repair protein ERCC-1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5Q468
      Related
      ENSMMUP00000042831.1, ENSMMUT00000053659.2
      Conserved Domains (2) summary
      pfam03834
      Location:100 → 213
      Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
      pfam14520
      Location:239 → 285
      HHH_5; Helix-hairpin-helix domain

    6. XM_015124272.2 → XP_014979758.1  DNA excision repair protein ERCC-1 isoform X2

      Conserved Domains (2) summary
      pfam00633
      Location:236 → 261
      HHH; Helix-hairpin-helix motif
      pfam03834
      Location:100 → 213
      Rad10; Binding domain of DNA repair protein Ercc1 (rad10/Swi10)
    Nucleotide Protein
    Heading Accession and Version

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