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    TCF4 transcription factor 4 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 695814, updated on 17-Aug-2024

    Summary

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    Official Symbol
    TCF4provided by VGNC
    Official Full Name
    transcription factor 4provided by VGNC
    Primary source
    VGNC:VGNC:78288
    See related
    Ensembl:ENSMMUG00000012001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See TCF4 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    32
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 18 NC_041771.1 (24602671..24971722)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 18 NC_027910.1 (44661729..45031220, complement)

    Chromosome 18 - NC_041771.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC114673800 Neighboring gene small nucleolar RNA SNORA73 family Neighboring gene small nuclear ribonucleoprotein Sm D2 pseudogene Neighboring gene uncharacterized LOC106994518 Neighboring gene coiled-coil domain containing 68

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor 4
    Names
    transcription factor 7-like 2 (T-cell specific, HMG-box)

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041771.1 Reference Mmul_10 Primary Assembly

      Range
      24602671..24971722
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122035.2 → XP_014977521.1  transcription factor 4 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QWY0, H9ELW2
      Conserved Domains (1) summary
      cd18945
      Location:562 → 646
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    2. XM_015122038.2 → XP_014977524.1  transcription factor 4 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:538 → 622
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    3. XM_028838247.1 → XP_028694080.1  transcription factor 4 isoform X11

      UniProtKB/TrEMBL
      A0A1D5QWY0, F7CLF2, F7H0C9
      Related
      ENSMMUP00000059869.2, ENSMMUT00000078160.2
      Conserved Domains (1) summary
      cd18945
      Location:534 → 618
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    4. XM_028838245.1 → XP_028694078.1  transcription factor 4 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QWY0, H9ELW2
      Conserved Domains (1) summary
      cd18945
      Location:562 → 646
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    5. XM_015122033.2 → XP_014977519.1  transcription factor 4 isoform X8

      UniProtKB/TrEMBL
      A0A1D5QWY0, F7CLG7, H9ELW1
      Related
      ENSMMUP00000041206.3, ENSMMUT00000048169.3
      Conserved Domains (1) summary
      cd18945
      Location:558 → 642
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    6. XM_015122032.2 → XP_014977518.1  transcription factor 4 isoform X6

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:561 → 645
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    7. XM_015122034.2 → XP_014977520.1  transcription factor 4 isoform X9

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:557 → 641
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    8. XM_028838241.1 → XP_028694074.1  transcription factor 4 isoform X1

      Conserved Domains (1) summary
      smart00353
      Location:718 → 771
      HLH; helix loop helix domain

    9. XM_028838243.1 → XP_028694076.1  transcription factor 4 isoform X3

      Conserved Domains (1) summary
      smart00353
      Location:714 → 767
      HLH; helix loop helix domain

    10. XM_015122036.2 → XP_014977522.1  transcription factor 4 isoform X5

      UniProtKB/TrEMBL
      A0A1D5QWY0, H9ELW2
      Related
      ENSMMUP00000052560.2, ENSMMUT00000076989.2
      Conserved Domains (1) summary
      cd18945
      Location:562 → 646
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    11. XM_015122037.2 → XP_014977523.1  transcription factor 4 isoform X7

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:560 → 644
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    12. XM_015122054.2 → XP_014977540.1  transcription factor 4 isoform X20

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:556 → 640
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    13. XM_028838242.1 → XP_028694075.1  transcription factor 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:537 → 621
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    14. XM_028838244.1 → XP_028694077.1  transcription factor 4 isoform X4

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:533 → 617
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    15. XM_028838248.1 → XP_028694081.1  transcription factor 4 isoform X11

      UniProtKB/TrEMBL
      A0A1D5QWY0, F7CLF2, F7H0C9
      Related
      ENSMMUP00000015736.4, ENSMMUT00000016803.4
      Conserved Domains (1) summary
      cd18945
      Location:534 → 618
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    16. XM_015122039.2 → XP_014977525.1  transcription factor 4 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:538 → 622
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    17. XM_015122041.2 → XP_014977527.1  transcription factor 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:537 → 621
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    18. XM_015122040.2 → XP_014977526.1  transcription factor 4 isoform X10

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:538 → 622
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    19. XM_015122043.2 → XP_014977529.1  transcription factor 4 isoform X11

      UniProtKB/TrEMBL
      A0A1D5QWY0, F7CLF2, F7H0C9
      Conserved Domains (1) summary
      cd18945
      Location:534 → 618
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    20. XM_015122042.2 → XP_014977528.1  transcription factor 4 isoform X2

      UniProtKB/TrEMBL
      A0A1D5QWY0
      Conserved Domains (1) summary
      cd18945
      Location:537 → 621
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    21. XM_028838249.1 → XP_028694082.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    22. XM_028838250.1 → XP_028694083.1  transcription factor 4 isoform X13

      UniProtKB/TrEMBL
      A0A1D5Q5M9
      Conserved Domains (1) summary
      cd18945
      Location:428 → 512
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    23. XM_015122047.2 → XP_014977533.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Related
      ENSMMUP00000041207.2, ENSMMUT00000048170.3
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    24. XM_028838259.1 → XP_028694092.1  transcription factor 4 isoform X13

      UniProtKB/TrEMBL
      A0A1D5Q5M9
      Conserved Domains (1) summary
      cd18945
      Location:428 → 512
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    25. XM_028838251.1 → XP_028694084.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    26. XM_028838258.1 → XP_028694091.1  transcription factor 4 isoform X13

      UniProtKB/TrEMBL
      A0A1D5Q5M9
      Conserved Domains (1) summary
      cd18945
      Location:428 → 512
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    27. XM_028838254.1 → XP_028694087.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    28. XM_028838260.1 → XP_028694093.1  transcription factor 4 isoform X13

      UniProtKB/TrEMBL
      A0A1D5Q5M9
      Conserved Domains (1) summary
      cd18945
      Location:428 → 512
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    29. XM_028838253.1 → XP_028694086.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    30. XM_015122045.2 → XP_014977531.1  transcription factor 4 isoform X15

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:491 → 575
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    31. XM_015122046.2 → XP_014977532.1  transcription factor 4 isoform X16

      Conserved Domains (1) summary
      cd18945
      Location:487 → 571
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    32. XM_015122044.2 → XP_014977530.1  transcription factor 4 isoform X14

      Conserved Domains (1) summary
      cd18945
      Location:492 → 576
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    33. XM_015122049.2 → XP_014977535.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    34. XM_015122050.2 → XP_014977536.1  transcription factor 4 isoform X13

      UniProtKB/TrEMBL
      A0A1D5Q5M9
      Related
      ENSMMUP00000043345.2, ENSMMUT00000065502.2
      Conserved Domains (1) summary
      cd18945
      Location:428 → 512
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    35. XM_028838257.1 → XP_028694090.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    36. XM_028838255.1 → XP_028694088.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    37. XM_015122048.2 → XP_014977534.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    38. XM_028838256.1 → XP_028694089.1  transcription factor 4 isoform X12

      UniProtKB/TrEMBL
      F7CLG1
      Conserved Domains (1) summary
      cd18945
      Location:432 → 516
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    39. XM_015122051.2 → XP_014977537.1  transcription factor 4 isoform X17

      UniProtKB/TrEMBL
      A0A1D5R9T2
      Related
      ENSMMUP00000057073.1, ENSMMUT00000065246.2
      Conserved Domains (1) summary
      cd18945
      Location:402 → 486
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    40. XM_015122052.2 → XP_014977538.1  transcription factor 4 isoform X18

      Conserved Domains (1) summary
      cd18945
      Location:398 → 482
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins

    41. XM_028838262.1 → XP_028694095.1  transcription factor 4 isoform X19

      Conserved Domains (1) summary
      cd18945
      Location:346 → 430
      bHLH_E-protein_TCF4_E2-2; basic helix-loop-helix (bHLH) domain found in transcription factor 4 (TCF-4) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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