U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Y43F4A.1 Leishmanolysin-like peptidase [ Caenorhabditis elegans ]

    Gene ID: 176737, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    Y43F4A.1
    Official Full Name
    Leishmanolysin-like peptidase
    Primary source
    WormBase:WBGene00012796
    Locus tag
    CELE_Y43F4A.1
    See related
    AllianceGenome:WB:WBGene00012796
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable peptidase activity. Predicted to be involved in cell adhesion; cell division; and proteolysis. Predicted to be located in membrane. Predicted to be active in cytoplasm. Is expressed in intestine; nervous system; pharynx; and seam cell. Orthologous to human LMLN (leishmanolysin like peptidase). [provided by Alliance of Genome Resources, Dec 2024]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Y43F4A.1 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    12
    Sequence:
    Chromosome: III; NC_003281.10 (13223072..13229465)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene UDG domain-containing protein Neighboring gene Tetraspanin Neighboring gene tRNA-Tyr Neighboring gene ncRNA Neighboring gene tRNA-Asn Neighboring gene ncRNA Neighboring gene Nanos-type domain-containing protein Neighboring gene 2-oxoisovalerate dehydrogenase subunit alpha

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003281.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metalloendopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metallopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    Leishmanolysin-like peptidase
    NP_001022870.1
    • Confirmed by transcript evidence
    NP_001022871.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      13223072..13229465
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001027699.6 → NP_001022870.1  Leishmanolysin-like peptidase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022870.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O62446
      Conserved Domains (1) summary
      cl19482
      Location:50 → 620
      Peptidase_M8; Leishmanolysin

    2. NM_001027700.4 → NP_001022871.1  Leishmanolysin-like peptidase [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001022871.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7Z1J4
      Conserved Domains (1) summary
      cl19482
      Location:30 → 66
      Peptidase_M8; Leishmanolysin
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O62446.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Chemical Information
    Molecular Biology Databases
    Research Materials
    Tools