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    chil-12 GH18 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 187357, updated on 9-Dec-2024

    Summary

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    Official Symbol
    chil-12
    Official Full Name
    GH18 domain-containing protein
    Primary source
    WormBase:WBGene00010799
    Locus tag
    CELE_M01B2.6
    See related
    AllianceGenome:WB:WBGene00010799
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable chitin binding activity. Predicted to be involved in carbohydrate metabolic process. Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See chil-12 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    4
    Sequence:
    Chromosome: V; NC_003283.11 (15241559..15244003)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear hormone receptor family member nhr-164 Neighboring gene Serpentine Receptor, class T Neighboring gene G_PROTEIN_RECEP_F1_2 domain-containing protein Neighboring gene Protein kinase domain-containing protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Natural Infection of C. elegans by an Oomycete Reveals a New Pathogen-Specific Immune Response. Osman GA, et al. Curr Biol, 2018 Feb 19. PMID 29398216
    2. Increasing Complexity of the N-Glycome During Caenorhabditis Development. Wilson IBH, et al. Mol Cell Proteomics, 2023 Mar. PMID 36717059, Free PMC Article
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    GH18 domain-containing protein
    NP_506770.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      15241559..15244003
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074369.3 → NP_506770.2  GH18 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_506770.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XU76
      Conserved Domains (1) summary
      smart00636
      Location:94 → 420
      Glyco_18; Glyco_18 domain
    Nucleotide Protein
    Heading Accession and Version

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