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    phat-6 PHAryngeal gland Toxin-related [ Caenorhabditis elegans ]

    Gene ID: 181614, updated on 9-Dec-2024

    Summary

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    Official Symbol
    phat-6
    Official Full Name
    PHAryngeal gland Toxin-related
    Primary source
    WormBase:WBGene00011683
    Locus tag
    CELE_T10B10.6
    See related
    AllianceGenome:WB:WBGene00011683
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Involved in nematode pharyngeal gland morphogenesis. Is expressed in g1AL; g1AR; g1P; g2L; and g2R. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See phat-6 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    5
    Sequence:
    Chromosome: X; NC_003284.9 (15193086..15194383, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Glycine N-acyltransferase-like protein Neighboring gene ncRNA Neighboring gene C2 domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The HLH-6 transcription factor regulates C. elegans pharyngeal gland development and function. Smit RB, et al. PLoS Genet, 2008 Oct. PMID 18927627, Free PMC Article
    2. Delayed development and lifespan extension as features of metabolic lifestyle alteration in C. elegans under dietary restriction. Szewczyk NJ, et al. J Exp Biol, 2006 Oct. PMID 17023606
    3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in nematode pharyngeal gland morphogenesis IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHAryngeal gland Toxin-related
    NP_510525.1
    • Product from WormBase gene class phat;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      15193086..15194383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_078124.6 → NP_510525.1  PHAryngeal gland Toxin-related [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_510525.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q22373
    Nucleotide Protein
    Heading Accession and Version

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