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    C03A3.2 Transmembrane protein 104 homolog [ Caenorhabditis elegans ]

    Gene ID: 181315, updated on 9-Dec-2024

    Summary

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    Official Symbol
    C03A3.2
    Official Full Name
    Transmembrane protein 104 homolog
    Primary source
    WormBase:WBGene00007267
    Locus tag
    CELE_C03A3.2
    See related
    AllianceGenome:WB:WBGene00007267
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. Is expressed in several structures, including body wall musculature; nervous system; pharynx; seam cell; and vulval muscle. Orthologous to human TMEM104 (transmembrane protein 104). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See C03A3.2 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    10
    Sequence:
    Chromosome: X; NC_003284.9 (11262848..11266324)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene tRNA-Arg Neighboring gene ncRNA Neighboring gene TMEM135_C_rich domain-containing protein;Transmembrane protein Neighboring gene Uncharacterized protein Neighboring gene Metallo-beta-lactamase domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Transmembrane protein 104 homolog
    NP_509879.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      11262848..11266324
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_077478.8 → NP_509879.2  Transmembrane protein 104 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_509879.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q17598
      Conserved Domains (1) summary
      cl00456
      Location:22 → 332
      SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q17598.2

    Gene LinkOut

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