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    nod1 protein Nod1 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543030, updated on 18-Sep-2024

    Summary

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    Official Symbol
    nod1
    Official Full Name
    protein Nod1
    Primary source
    PomBase:SPAC12B10.10
    Locus tag
    SPOM_SPAC12B10.10
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See nod1 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (4590166..4591524)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA(Ile)-lysidine synthetase family protein Neighboring gene ncRNA Neighboring gene putative S-adenosylmethionine transporter Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene glucan glucosidase exg2 Neighboring gene ncRNA Neighboring gene DNA repair protein Rhp41

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fission yeast Nod1 is a component of cortical nodes involved in cell size control and division site placement. Jourdain I, et al. PLoS One, 2013. PMID 23349808, Free PMC Article
    2. Cooperation between Rho-GEF Gef2 and its binding partner Nod1 in the regulation of fission yeast cytokinesis. Zhu YH, et al. Mol Biol Cell, 2013 Oct. PMID 23966468, Free PMC Article
    3. Nanoscale architecture of the Schizosaccharomyces pombe contractile ring. McDonald NA, et al. Elife, 2017 Sep 15. PMID 28914606, Free PMC Article
    4. Systematic localization study on novel proteins encoded by meiotically up-regulated ORFs in fission yeast. Ikebe C, et al. Biosci Biotechnol Biochem, 2011. PMID 22146723
    5. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitotic cytokinesis, division site positioning IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    involved_in mitotic cytokinesis, division site positioning IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cell division site HDA PubMed 
    is_active_in medial cortical node EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in medial cortical node IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in mitotic actomyosin contractile ring EXP
    Inferred from Experiment
    more info
    		 PubMed 
    is_active_in mitotic actomyosin contractile ring IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in mitotic actomyosin contractile ring, intermediate layer IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Nod1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      4590166..4591524
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001020070.3 → NP_594642.1  protein Nod1 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_594642.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q10443
      Conserved Domains (1) summary
      pfam17114
      Location:59 → 203
      Nod1; Gef2-related medial cortical node protein Nod1
    Nucleotide Protein
    Heading Accession and Version

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