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    pole.L polymerase (DNA directed), epsilon, catalytic subunit L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 394427, updated on 4-Jan-2025

    Summary

    Official Symbol
    pole.L
    Official Full Name
    polymerase (DNA directed), epsilon, catalytic subunit L homeolog
    Primary source
    Xenbase:XB-GENE-1011592
    Locus tag
    XELAEV_18007393mg
    See related
    EnsemblRapid:ENSXLAG00005017012 AllianceGenome:Xenbase:XB-GENE-1011592
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    pole; pole1; pole-A
    Summary
    Predicted to enable several functions, including 4 iron, 4 sulfur cluster binding activity; DNA-directed DNA polymerase activity; and zinc ion binding activity. Predicted to act upstream of or within DNA repair and DNA replication. Predicted to be located in nuclear lumen. Predicted to be part of epsilon DNA polymerase complex. Human ortholog(s) of this gene implicated in colorectal cancer (multiple); endometrial cancer (multiple); lung cancer (multiple); and mismatch repair cancer syndrome. Orthologous to human POLE (DNA polymerase epsilon, catalytic subunit). [provided by Alliance of Genome Resources, Jan 2025]
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    Genomic context

    See pole.L in Genome Data Viewer
    Location:
    chromosome: 1L
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (156116960..156168548, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (143146584..143198336, complement)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121394514 Neighboring gene purinergic receptor P2X, ligand gated ion channel, 2 L homeolog Neighboring gene telomerase protein component 1 Neighboring gene peroxisomal membrane protein 2 L homeolog Neighboring gene pescadillo ribosomal biogenesis factor 1 L homeolog

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables DNA-directed DNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within DNA repair IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within DNA replication IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of epsilon DNA polymerase complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nuclear lumen IEA
    Inferred from Electronic Annotation
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    DNA polymerase epsilon catalytic subunit A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      156116960..156168548 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018260369.2XP_018115858.1  DNA polymerase epsilon catalytic subunit A

      UniProtKB/TrEMBL
      A0A1L8HZP3, A0A974E1L8, A0A974E2Z8
      Related
      ENSXLAP00005050724.1, ENSXLAT00005051881.1