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    BCKDHB branched chain keto acid dehydrogenase E1 subunit beta [ Gallus gallus (chicken) ]

    Gene ID: 395375, updated on 3-Dec-2024

    Summary

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    Symbol
    BCKDHBprovided by CGNC
    Full Name
    branched chain keto acid dehydrogenase E1 subunit betaprovided by CGNC
    Primary source
    CGNC:11837
    See related
    Ensembl:ENSGALG00010002431
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See BCKDHB in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (78744865..78857576, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (78537645..78649965, complement)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110231 Neighboring gene uncharacterized LOC121110233 Neighboring gene uncharacterized LOC121110234 Neighboring gene TTK protein kinase Neighboring gene microRNA 1712

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. cDNA cloning of the chicken branched-chain alpha-keto acid dehydrogenase complex. Chicken-specific residues of the acyltransferase affect the overall activity and the interaction with the dehydrogenase. Ono K, et al. Eur J Biochem, 2001 Feb. PMID 11168412
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables catalytic activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in branched-chain amino acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to nutrient IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    2-oxoisovalerate dehydrogenase subunit beta, mitochondrial
    Names
    branched chain keto acid dehydrogenase E1, beta polypeptide (maple syrup urine disease)
    mitochondrial branched-chain alpha-keto acid dehydrogenase E1-beta subunit
    NP_989988.2
    XP_046768900.1
    XP_046794370.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_204657.2 → NP_989988.2  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000065
      UniProtKB/TrEMBL
      A0A1D5P765
      Related
      ENSGALP00010003436.1, ENSGALT00010005597.1
      Conserved Domains (1) summary
      PTZ00182
      Location:48 → 377
      PTZ00182; 3-methyl-2-oxobutanate dehydrogenase; Provisional

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      78744865..78857576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938414.1 → XP_046794370.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A1D5P765

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      78537645..78649965 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046912944.1 → XP_046768900.1  2-oxoisovalerate dehydrogenase subunit beta, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A1D5P765
    Nucleotide Protein Strain
    Heading Accession and Version

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