U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    MGC75582.S MGC75582, possible similarity to act2 S homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 779129, updated on 4-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    MGC75582.S
    Official Full Name
    MGC75582, possible similarity to act2 S homeolog
    Primary source
    Xenbase:XB-GENE-22064001
    Locus tag
    XELAEV_18010376mg
    See related
    EnsemblRapid:ENSXLAG00005016126 AllianceGenome:Xenbase:XB-GENE-22064001
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    act2
    Summary
    Predicted to enable ATP binding activity and hydrolase activity. Predicted to be located in cytoplasm and cytoskeleton. [provided by Alliance of Genome Resources, Jan 2025]
    Annotation information
    Annotation category: partial on reference assembly
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See MGC75582.S in Genome Data Viewer
    Location:
    chromosome: 1S
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1S NC_054372.1 (134415141..134416910, complement)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1S NC_030725.1 (118785763..118787532, complement)

    Chromosome 1S - NC_054372.1Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 54 S homeolog Neighboring gene RBPJ interacting and tubulin associated 1 S homeolog Neighboring gene mediator complex subunit 13-like S homeolog Neighboring gene T-box 3 S homeolog Neighboring gene T-box 5 S homeolog

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A processed gene coding for a sarcomeric actin in Xenopus laevis and Xenopus tropicalis. Stutz F, et al. EMBO J, 1987 Jul. PMID 3653078, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC80989

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    actin, alpha skeletal muscle 2
    Names
    actin alpha 2
    actin, alpha sarcomeric/cardiac
    alpha2
    alpha2p

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001096757.1 → NP_001090226.1  actin, alpha skeletal muscle 2

      See identical proteins and their annotated locations for NP_001090226.1

      Status: PROVISIONAL

      Source sequence(s)
      BC073473
      UniProtKB/Swiss-Prot
      A9ULV6, P10995, P53506, Q6GNN1
      UniProtKB/TrEMBL
      A0A974DV83
      Related
      ENSXLAP00005047451.1, ENSXLAT00005048555.1
      Conserved Domains (1) summary
      PTZ00281
      Location:4 → 377
      PTZ00281; actin; Provisional

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054372.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      134415141..134416910 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P10995.1 GenPept UniProtKB/Swiss-Prot:P10995

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials