U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG5854 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42831, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG5854provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039130
    Locus tag
    Dmel_CG5854
    See related
    AllianceGenome:FB:FBgn0039130
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.306; Dmel\CG5854
    Summary
    Is expressed in several structures, including adult head; anterior endoderm anlage; mesoderm; midline primordium; and unpaired neurons. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG5854 in Genome Data Viewer
    Location:
    95C13-95C13; 3-81 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23933912..23935964)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19759634..19761686)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ribosomal protein S19b Neighboring gene Glutamate dehydrogenase Neighboring gene uncharacterized protein Neighboring gene Glutamyl-prolyl-tRNA synthetase Neighboring gene antisense RNA:CR46092

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Two independent duplications forming the Cyp307a genes in Drosophila. Sztal T, et al. Insect Biochem Mol Biol, 2007 Oct. PMID 17785192
    2. Comparative transcriptomics across 14 Drosophila species reveals signatures of longevity. Ma S, et al. Aging Cell, 2018 Aug. PMID 29671950, Free PMC Article
    3. Mediation of Drosophila autosomal dosage effects and compensation by network interactions. Malone JH, et al. Genome Biol, 2012 Apr 24. PMID 22531030, Free PMC Article
    4. Gene expression profiling of the developing Drosophila CNS midline cells. Kearney JB, et al. Dev Biol, 2004 Nov 15. PMID 15501232, Free PMC Article
    5. MBD5 and MBD6 stabilize the BAP1 complex and promote BAP1-dependent cancer. Tsuboyama N, et al. Genome Biol, 2022 Sep 30. PMID 36180891, Free PMC Article

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG5854-PA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      23933912..23935964
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142939.2 → NP_651196.1  uncharacterized protein Dmel_CG5854 [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651196.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8I0A0, Q9VCF8
      Related
      FBpp0083882
      Conserved Domains (2) summary
      pfam01370
      Location:7 → 248
      Epimerase; NAD dependent epimerase/dehydratase family
      cl21454
      Location:7 → 265
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8I0A0 Q8I0A0
    Q9VCF8 Q9VCF8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools