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    tag-278 Putative protein tag-278 [ Caenorhabditis elegans ]

    Gene ID: 180658, updated on 9-Dec-2024

    Summary

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    Official Symbol
    tag-278
    Official Full Name
    Putative protein tag-278
    Primary source
    WormBase:WBGene00015356
    Locus tag
    CELE_C02F12.7
    See related
    AllianceGenome:WB:WBGene00015356
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Is expressed in body wall musculature. Orthologous to human FAM184A (family with sequence similarity 184 member A). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See tag-278 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    17
    Sequence:
    Chromosome: X; NC_003284.9 (3684212..3689205, complement)

    Chromosome X - NC_003284.9Genomic Context describing neighboring genes Neighboring gene BPTI/Kunitz inhibitor domain-containing protein C02F12.5 Neighboring gene Homeobox protein ceh-63 Neighboring gene Putative protein tag-52 Neighboring gene Tetraspanin-17 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene tRNA-Met Neighboring gene Protein kinase domain-containing protein;Putative serine/threonine-protein kinase C01C4.3 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003284.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The embryonic muscle transcriptome of Caenorhabditis elegans. Fox RM, et al. Genome Biol, 2007. PMID 17848203, Free PMC Article
    2. The relationship between intraflagellar transport and upstream protein trafficking pathways and macrocyclic lactone resistance in Caenorhabditis elegans. Brinzer RA, et al. G3 (Bethesda), 2024 Mar 6. PMID 38227795, Free PMC Article
    3. Amino acid and protein specificity of protein fatty acylation in C. elegans. Zhang B, et al. Proc Natl Acad Sci U S A, 2024 Jan 30. PMID 38252833, Free PMC Article
    4. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    5. OrthoList: a compendium of C. elegans genes with human orthologs. Shaye DD, et al. PLoS One, 2011. PMID 21647448, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    Putative protein tag-278
    NP_508635.2
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003284.9 Reference assembly

      Range
      3684212..3689205 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_076234.5 → NP_508635.2  Putative protein tag-278 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_508635.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q11102
      Conserved Domains (4) summary
      TIGR02168
      Location:191 → 1016
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam05791
      Location:695 → 755
      Bacillus_HBL; Bacillus haemolytic enterotoxin (HBL)
      cl19107
      Location:531 → 726
      SPFH_like; core domain of the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily
      cl19219
      Location:205 → 299
      DUF342; Protein of unknown function (DUF342)
    Nucleotide Protein
    Heading Accession and Version

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