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    glmna glomulin, FKBP associated protein a [ Danio rerio (zebrafish) ]

    Gene ID: 492774, updated on 9-Dec-2024

    Summary

    Official Symbol
    glmnaprovided by ZNC
    Official Full Name
    glomulin, FKBP associated protein aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041114-120
    See related
    Ensembl:ENSDARG00000058267 AllianceGenome:ZFIN:ZDB-GENE-041114-120
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    glmnl; zgc:101567
    Summary
    Predicted to enable ubiquitin-protein transferase inhibitor activity. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in arteriovenous malformation; glomangioma; and glomus tumor. Orthologous to human GLMN (glomulin, FKBP associated protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See glmna in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (10821104..10857898)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (11037490..11074299)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene growth factor independent 1A transcription repressor a Neighboring gene RNA polymerase II associated protein 2 Neighboring gene cell division cycle 7 homolog (S. cerevisiae) Neighboring gene transcription elongation factor A (SII) N-terminal and central domain containing 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase inhibitor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    glomulin, FKBP associated protein a
    Names
    glomulin, like

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007415.1NP_001007416.1  glomulin, FKBP associated protein a

      See identical proteins and their annotated locations for NP_001007416.1

      Status: PROVISIONAL

      Source sequence(s)
      BC085370
      UniProtKB/TrEMBL
      Q5U3W2
      Related
      ENSDARP00000075537.2, ENSDART00000081094.3
      Conserved Domains (1) summary
      pfam08568
      Location:1529
      Kinetochor_Ybp2; uncharacterized protein family, YAP/Alf4/glomulin

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      10821104..10857898
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021480037.2XP_021335712.1  glomulin, FKBP associated protein a isoform X1

      UniProtKB/TrEMBL
      A0A8M9PW48, B0UYH7
      Related
      ENSDARP00000144115.1, ENSDART00000174629.2
      Conserved Domains (1) summary
      pfam08568
      Location:1529
      Kinetochor_Ybp2; Uncharacterized protein family, YAP/Alf4/glomulin
    2. XM_005171163.5XP_005171220.1  glomulin, FKBP associated protein a isoform X1

      See identical proteins and their annotated locations for XP_005171220.1

      UniProtKB/TrEMBL
      A0A8M9PW48, B0UYH7
      Related
      ENSDARP00000114877.1, ENSDART00000145770.4
      Conserved Domains (1) summary
      pfam08568
      Location:1529
      Kinetochor_Ybp2; Uncharacterized protein family, YAP/Alf4/glomulin