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    wif1 wnt inhibitory factor 1 [ Danio rerio (zebrafish) ]

    Gene ID: 30476, updated on 9-Dec-2024

    Summary

    Official Symbol
    wif1provided by ZNC
    Official Full Name
    wnt inhibitory factor 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-990712-17
    See related
    Ensembl:ENSDARG00000005541 AllianceGenome:ZFIN:ZDB-GENE-990712-17
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:110507
    Summary
    Predicted to enable activin receptor binding activity and nodal binding activity. Acts upstream of or within habenula development; negative regulation of canonical Wnt signaling pathway; and swim bladder development. Predicted to be active in cell surface and extracellular region. Is expressed in several structures, including anterior swim bladder bud; nervous system; paraxial mesoderm; pharyngeal arch; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in breast cancer; renal cell carcinoma; and urinary bladder cancer. Orthologous to human WIF1 (WNT inhibitory factor 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See wif1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (12931738..12956718)
    105 previous assembly GRCz10 (GCF_000002035.5) 4 NC_007115.6 (12932930..12957869)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase B3 Neighboring gene LEM domain containing 3 Neighboring gene von Hippel-Lindau tumor suppressor like Neighboring gene transmembrane BAX inhibitor motif containing 4

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

    Pathways from PubChem

    General protein information

    Preferred Names
    wnt inhibitory factor 1
    Names
    WIF-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_131229.2NP_571304.2  wnt inhibitory factor 1 precursor

      Status: VALIDATED

      Source sequence(s)
      BX119963
      UniProtKB/Swiss-Prot
      Q9W6F9
      Related
      ENSDARP00000019818.4, ENSDART00000016382.5

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      12931738..12956718
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068219511.1XP_068075612.1  wnt inhibitory factor 1 isoform X1

      UniProtKB/Swiss-Prot
      Q9W6F9