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    tspan13b tetraspanin 13b [ Danio rerio (zebrafish) ]

    Gene ID: 449797, updated on 9-Dec-2024

    Summary

    Official Symbol
    tspan13bprovided by ZNC
    Official Full Name
    tetraspanin 13bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041010-45
    See related
    Ensembl:ENSDARG00000070479 AllianceGenome:ZFIN:ZDB-GENE-041010-45
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    tspan13; zgc:101833
    Summary
    Predicted to be located in membrane. Orthologous to human TSPAN13 (tetraspanin 13). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See tspan13b in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (30387996..30399203)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (30800683..30811890)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene karyopherin alpha 6 (importin alpha 7) Neighboring gene uncharacterized LOC137488528 Neighboring gene KH domain containing, RNA binding, signal transduction associated 1b Neighboring gene protein phosphatase 1, regulatory subunit 10 Neighboring gene anterior gradient 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    tetraspanin-13b
    Names
    tetraspanin 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005970.1NP_001005970.1  tetraspanin-13b

      See identical proteins and their annotated locations for NP_001005970.1

      Status: PROVISIONAL

      Source sequence(s)
      BC083295
      UniProtKB/TrEMBL
      B2GR64, F6NV26, Q5XJK6
      Related
      ENSDARP00000094250.2, ENSDART00000103474.5
      Conserved Domains (1) summary
      pfam00335
      Location:8183
      Tetraspannin; Tetraspanin family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      30387996..30399203
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)