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    znf740b zinc finger protein 740b [ Danio rerio (zebrafish) ]

    Gene ID: 767693, updated on 9-Dec-2024

    Summary

    Official Symbol
    znf740bprovided by ZNC
    Official Full Name
    zinc finger protein 740bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060929-660
    See related
    Ensembl:ENSDARG00000061174 AllianceGenome:ZFIN:ZDB-GENE-060929-660
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    znf740; zgc:153696
    Summary
    Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human ZNF740 (zinc finger protein 740). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See znf740b in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (36401572..36418060, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (36302738..36319252, complement)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene nuclear factor, erythroid 2 Neighboring gene COPI coat complex subunit zeta 1 Neighboring gene uncharacterized LOC103909707 Neighboring gene cysteine sulfinic acid decarboxylase

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC153696

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    zinc finger protein 740b
    Names
    zinc finger protein 740

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001076631.2NP_001070099.2  zinc finger protein 740b precursor

      Status: VALIDATED

      Source sequence(s)
      CU468730
      UniProtKB/TrEMBL
      A0A8M2B9H4, F1QPP4
      Related
      ENSDARP00000113405.1, ENSDART00000132273.4

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      36401572..36418060 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005162391.5XP_005162448.1  zinc finger protein 740b isoform X2

      See identical proteins and their annotated locations for XP_005162448.1

      UniProtKB/TrEMBL
      Q08C35
      Conserved Domains (2) summary
      sd00017
      Location:113133
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:153178
      zf-H2C2_2; Zinc-finger double domain
    2. XM_005162390.5XP_005162447.1  zinc finger protein 740b isoform X1

      See identical proteins and their annotated locations for XP_005162447.1

      UniProtKB/TrEMBL
      A0A8M2B9H4, F1QPP4
      Conserved Domains (1) summary
      sd00017
      Location:140160
      ZF_C2H2; C2H2 Zn finger [structural motif]
    3. XM_068216804.1XP_068072905.1  zinc finger protein 740b isoform X1

      UniProtKB/TrEMBL
      A0A8M2B9H4, F1QPP4