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    gig2o grass carp reovirus (GCRV)-induced gene 2o [ Danio rerio (zebrafish) ]

    Gene ID: 566020, updated on 9-Dec-2024

    Summary

    Official Symbol
    gig2oprovided by ZNC
    Official Full Name
    grass carp reovirus (GCRV)-induced gene 2oprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-130517-8
    See related
    Ensembl:ENSDARG00000086903 AllianceGenome:ZFIN:ZDB-GENE-130517-8
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to enable NAD+-protein poly-ADP-ribosyltransferase activity. Predicted to be active in cytoplasm. Is expressed in several structures, including eye; gill; heart; liver; and pleuroperitoneal region. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See gig2o in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (30381929..30382925, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (29781776..29782772, complement)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137490121 Neighboring gene sorting nexin 19a Neighboring gene zgc:158412 Neighboring gene serine/threonine kinase 36 (fused homolog, Drosophila)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    grass carp reovirus (GCRV)-induced gene 2o
    Names
    DreO
    Gig2-like protein DreO

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001245983.1NP_001232912.1  grass carp reovirus (GCRV)-induced gene 2o

      See identical proteins and their annotated locations for NP_001232912.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ269381
      UniProtKB/TrEMBL
      A0A8N7XJ52, F1QS23, F2WZ38
      Related
      ENSDARP00000108924.2, ENSDART00000125381.3
      Conserved Domains (1) summary
      cl00283
      Location:3595
      ADP_ribosyl; ADP_ribosylating enzymes catalyze the transfer of ADP_ribose from NAD+ to substrates. Bacterial toxins are cytoplasmic and catalyze the transfer of a single ADP_ribose unit to eukaryotic elongation factor 2, halting protein synthesis and killing the cell. ...

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      30381929..30382925 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)