U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    hyi hydroxypyruvate isomerase [ Danio rerio (zebrafish) ]

    Gene ID: 393305, updated on 9-Dec-2024

    Summary

    Official Symbol
    hyiprovided by ZNC
    Official Full Name
    hydroxypyruvate isomeraseprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1273
    See related
    Ensembl:ENSDARG00000030166 AllianceGenome:ZFIN:ZDB-GENE-040426-1273
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:63850
    Summary
    Predicted to enable hydroxypyruvate isomerase activity. Predicted to be involved in glyoxylate metabolic process. Orthologous to human HYI (hydroxypyruvate isomerase (putative)). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See hyi in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (2619778..2627527, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (2495473..2502075, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101882644 Neighboring gene mediator complex subunit 8 Neighboring gene SZT2 subunit of KICSTOR complex Neighboring gene KICSTOR complex protein SZT2 Neighboring gene uncharacterized LOC137495906 Neighboring gene protein tyrosine phosphatase receptor type Fa

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC63850

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables hydroxypyruvate isomerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables hydroxypyruvate isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in glyoxylate metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    putative hydroxypyruvate isomerase
    Names
    hydroxypyruvate isomerase homolog
    NP_956628.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200334.2NP_956628.2  putative hydroxypyruvate isomerase

      Status: VALIDATED

      Source sequence(s)
      CU694655, LO017867
      UniProtKB/Swiss-Prot
      Q7T3H9
      UniProtKB/TrEMBL
      F1QNK8
      Related
      ENSDARP00000131995.2, ENSDART00000158333.2

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      2619778..2627527 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)