pop7 POP7 homolog, ribonuclease P/MRP subunit [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pop7provided by ZNC
Official Full Name: POP7 homolog, ribonuclease P/MRP subunitprovided by ZNC
Primary source: ZFIN:ZDB-GENE-041010-88
See related: Ensembl:ENSDARG00000036394 AllianceGenome:ZFIN:ZDB-GENE-041010-88
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fj61g07; wu:fj61g07; zgc:103779
Summary: Predicted to enable nucleic acid binding activity. Predicted to be involved in tRNA processing. Predicted to act upstream of or within rRNA processing and tRNA 5'-leader removal. Predicted to be part of nucleolar ribonuclease P complex and ribonuclease MRP complex. Predicted to be active in nucleus. Orthologous to human POP7 (POP7 homolog, ribonuclease P/MRP subunit). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 7

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (21887354..21888521)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (21621016..21622183)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within RNA processing	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within rRNA processing	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within tRNA 5'-leader removal	IEA Inferred from Electronic Annotation more info
involved_in tRNA processing	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within tRNA processing	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of nucleolar ribonuclease P complex	IEA Inferred from Electronic Annotation more info
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of ribonuclease MRP complex	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ribonuclease P protein subunit p20

Names: processing of precursor 7, ribonuclease P family; processing of precursor 7, ribonuclease P/MRP subunit

NP_001006004.1

EC 3.1.26.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.