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    aplp1 amyloid beta (A4) precursor-like protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 404233, updated on 9-Dec-2024

    Summary

    Official Symbol
    aplp1provided by ZNC
    Official Full Name
    amyloid beta (A4) precursor-like protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040319-1
    See related
    Ensembl:ENSDARG00000098368 AllianceGenome:ZFIN:ZDB-GENE-040319-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    aplp; im:7153266; wu:fj55h01
    Summary
    Predicted to enable alpha-2A adrenergic receptor binding activity; alpha-2B adrenergic receptor binding activity; and alpha-2C adrenergic receptor binding activity. Predicted to be involved in axonogenesis and central nervous system development. Predicted to be located in membrane. Predicted to be active in Golgi apparatus and plasma membrane. Is expressed in nervous system. Orthologous to human APLP1 (amyloid beta precursor like protein 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See aplp1 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (37106135..37227453)
    105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (37204410..37328745)

    Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene kirre like nephrin family adhesion molecule 3, like Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene uncharacterized LOC137487777 Neighboring gene uncharacterized LOC100535321 Neighboring gene uncharacterized LOC100333235 Neighboring gene uncharacterized LOC108179338 Neighboring gene potassium inwardly rectifying channel subfamily J member 20

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables alpha-2A adrenergic receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables alpha-2B adrenergic receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables alpha-2C adrenergic receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables heparin binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables transition metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in axonogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in central nervous system development IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in Golgi apparatus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    amyloid-like protein 1; amyloid beta precursor like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007126.7 Reference GRCz11 Primary Assembly

      Range
      37106135..37227453
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001342885.9XP_001342921.4  amyloid beta precursor like protein 1

      UniProtKB/TrEMBL
      A0A0R4IXG2, A0A8M1PZM7
      Related
      ENSDARP00000140309.1, ENSDART00000157762.3
      Conserved Domains (5) summary
      smart00006
      Location:37195
      A4_EXTRA; amyloid A4
      pfam02177
      Location:39139
      APP_N; Amyloid A4 N-terminal heparin-binding
      pfam10515
      Location:670720
      APP_amyloid; beta-amyloid precursor protein C-terminus
      pfam12924
      Location:141195
      APP_Cu_bd; Copper-binding of amyloid precursor, CuBD
      pfam12925
      Location:339520
      APP_E2; E2 domain of amyloid precursor protein