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    NSUN6 NOP2/Sun RNA methyltransferase family member 6 [ Gallus gallus (chicken) ]

    Gene ID: 428419, updated on 3-Dec-2024

    Summary

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    Symbol
    NSUN6provided by CGNC
    Full Name
    NOP2/Sun RNA methyltransferase family member 6provided by CGNC
    Primary source
    CGNC:6499
    See related
    Ensembl:ENSGALG00010006033
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NSUN6 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (19002610..19024902)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (19032940..19052185)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene MAM and LDL receptor class A domain containing 1 Neighboring gene ADP ribosylation factor like GTPase 5B Neighboring gene calcium voltage-gated channel auxiliary subunit beta 2 Neighboring gene solute carrier family 39 member 12 Neighboring gene mannose receptor C-type 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative methyltransferase NSUN6; tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
    Names
    NOL1/NOP2/Sun domain family, member 6
    NOP2/Sun domain family, member 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      19002610..19024902
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046938256.1 → XP_046794212.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6

    2. XM_040691943.2 → XP_040547877.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_040691901.2 → XP_040547835.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    4. XM_025148390.3 → XP_025004158.2  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    5. XM_025148389.3 → XP_025004157.2  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Related
      ENSGALP00010008480.1, ENSGALT00010014450.1
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    6. XM_040691960.2 → XP_040547894.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    7. XM_040691927.2 → XP_040547861.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    8. XM_004939249.5 → XP_004939306.2  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Related
      ENSGALP00010008477.1, ENSGALT00010014442.1
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    RNA

    1. XR_005856237.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      19032940..19052185
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040662947.2 → XP_040518881.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    2. XM_040662951.2 → XP_040518885.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    3. XM_040662949.2 → XP_040518883.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    4. XM_040662942.2 → XP_040518876.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    5. XM_040662945.2 → XP_040518879.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    6. XM_040662948.2 → XP_040518882.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    7. XM_040662950.2 → XP_040518884.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    8. XM_040662943.2 → XP_040518877.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    9. XM_040662946.2 → XP_040518880.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]

    10. XM_040662944.2 → XP_040518878.1  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6

      UniProtKB/TrEMBL
      A0A8V0XU05, A0A8V0XWR6
      Conserved Domains (2) summary
      smart00359
      Location:113 → 202
      PUA; Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
      COG0144
      Location:218 → 467
      RsmB; 16S rRNA C967 or C1407 C5-methylase, RsmB/RsmF family [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
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