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    F36D3.5 BRCT domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 185352, updated on 9-Dec-2024

    Summary

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    Official Symbol
    F36D3.5
    Official Full Name
    BRCT domain-containing protein
    Primary source
    WormBase:WBGene00009471
    Locus tag
    CELE_F36D3.5
    See related
    AllianceGenome:WB:WBGene00009471
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See F36D3.5 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    12
    Sequence:
    Chromosome: V; NC_003283.11 (16510362..16515240, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Nuclear hormone receptor family member nhr-54 Neighboring gene Gustatory receptor Neighboring gene Major sperm protein Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    BRCT domain-containing protein
    NP_507181.3
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      16510362..16515240 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_074780.4 → NP_507181.3  BRCT domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_507181.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      O45463
      Conserved Domains (5) summary
      smart00453
      Location:25 → 93
      WSN; Worm-specific (usually) N-terminal domain
      smart00292
      Location:985 → 1065
      BRCT; breast cancer carboxy-terminal domain
      cd00204
      Location:873 → 946
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam13637
      Location:879 → 930
      Ank_4; Ankyrin repeats (many copies)
      sd00045
      Location:876 → 907
      ANK; ANK repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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