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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001033898.1 → NP_001029070.1 calumenin isoform b precursor
See identical proteins and their annotated locations for NP_001029070.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks one alternate in-frame exon and contains another alternate in-frame exon compare to variant 1. The resulting isoform (b) is of the same size as isoform a, but it differs in its internal aa sequence.
- Source sequence(s)
-
BC101908
- UniProtKB/TrEMBL
- A0A0G2K4X7, A6IEC6, F7ETZ4, Q3MID6
- Related
- ENSRNOP00000008972.6, ENSRNOT00000008972.8
- Conserved Domains (3) summary
-
- cd00051
Location:157 → 214
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- pfam13499
Location:157 → 214
- EF-hand_7; EF-hand domain pair
- cl08302
Location:193 → 258
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
-
NM_022535.2 → NP_071980.2 calumenin isoform a precursor
See identical proteins and their annotated locations for NP_071980.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes isoform a. Both isoforms are of the same length but differ in their internal aa sequence.
- Source sequence(s)
-
BC101908, CK476875
- UniProtKB/TrEMBL
- A6IEC5, G3V6S3
- Related
- ENSRNOP00000008356.5, ENSRNOT00000008356.7
- Conserved Domains (3) summary
-
- cd00051
Location:157 → 214
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
- pfam13499
Location:157 → 214
- EF-hand_7; EF-hand domain pair
- cl08302
Location:193 → 258
- EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086022.1 Reference GRCr8
- Range
-
58914456..58941957
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)