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    CNGC15 cyclic nucleotide-gated channel 15 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817372, updated on 18-Sep-2024

    Summary

    Official Symbol
    CNGC15
    Official Full Name
    cyclic nucleotide-gated channel 15
    Primary source
    TAIR:AT2G28260
    Locus tag
    AT2G28260
    See related
    Araport:AT2G28260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCNGC15; cyclic nucleotide-gated channel 15; T3B23.7; T3B23_7
    Summary
    member of Cyclic nucleotide gated channel family
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    Genomic context

    See CNGC15 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (12049443..12052643)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ATP-dependent helicase family protein Neighboring gene ncRNA Neighboring gene Protein kinase superfamily protein Neighboring gene ncRNA Neighboring gene Cysteine/Histidine-rich C1 domain family protein Neighboring gene miscRNA

    General gene information

    NM_001336157.1
    NM_128386.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in plasma membrane PubMed 

    General protein information

    Preferred Names
    cyclic nucleotide-gated channel 15
    NP_180393.1
    • cyclic nucleotide-gated channel 15 (CNGC15); FUNCTIONS IN: cyclic nucleotide binding, calmodulin binding, cation channel activity; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Ion transport (InterPro:IPR005821), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 14 (TAIR:AT2G24610.1); Has 3177 Blast hits to 3099 proteins in 290 species: Archae - 0; Bacteria - 161; Metazoa - 1483; Fungi - 19; Plants - 962; Viruses - 0; Other Eukaryotes - 552 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12049443..12052643
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128386.2 → NP_180393.1  cyclic nucleotide-gated channel 15 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180393.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SL29
      UniProtKB/TrEMBL
      A0A178VZ07, A0A5S9X1Y1, A0A7G2ED22
      Conserved Domains (2) summary
      PLN03192
      Location:127 → 489
      PLN03192; Voltage-dependent potassium channel; Provisional
      cd00038
      Location:471 → 602
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    2. NM_001336157.1 → NP_001324840.1  cyclic nucleotide-gated channel 15 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B1B6, A0A7G2ED22
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