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    PAP6 purple acid phosphatase 6 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842090, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PAP6
    Official Full Name
    purple acid phosphatase 6
    Primary source
    TAIR:AT1G56360
    Locus tag
    AT1G56360
    See related
    Araport:AT1G56360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPAP6; F14G9.2; F14G9_2; purple acid phosphatase 6
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    Genomic context

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    See PAP6 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (21098603..21100842, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Pseudouridine synthase family protein Neighboring gene Peptide chain release factor 2 Neighboring gene Mitochondrial transcription termination factor family protein Neighboring gene Plant self-incompatibility protein S1 family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression patterns of purple acid phosphatase genes in Arabidopsis organs and functional analysis of AtPAP23 predominantly transcribed in flower. Zhu H, et al. Plant Mol Biol, 2005 Nov. PMID 16244908
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables acid phosphatase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within dephosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    purple acid phosphatase 6
    NP_176033.1
    • purple acid phosphatase 6 (PAP6); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: petal, leaf whorl, sepal, flower; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Fibronectin, type III (InterPro:IPR003961), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 25 (TAIR:AT4G36350.1); Has 1965 Blast hits to 1947 proteins in 404 species: Archae - 6; Bacteria - 629; Metazoa - 188; Fungi - 79; Plants - 756; Viruses - 0; Other Eukaryotes - 307 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      21098603..21100842 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104516.1 → NP_176033.1  purple acid phosphatase 6 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176033.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q5MAV2, Q9C510
      UniProtKB/TrEMBL
      A0A178WA73, A0A5S9WQI7
      Conserved Domains (2) summary
      cd00839
      Location:153 → 450
      MPP_PAPs; purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain
      pfam16656
      Location:50 → 147
      Pur_ac_phosph_N; Purple acid Phosphatase, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C510.1

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