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    proteasome inhibitor-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824564, updated on 18-Sep-2024

    Summary

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    Official Full Name
    proteasome inhibitor-like protein
    Primary source
    TAIR:AT3G53970
    Locus tag
    AT3G53970
    See related
    Araport:AT3G53970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (19985087..19987377)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Major facilitator superfamily protein Neighboring gene tRNA-Gly Neighboring gene Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis PROTEASOME REGULATOR1 is required for auxin-mediated suppression of proteasome activity and regulates auxin signalling. Yang BJ, et al. Nat Commun, 2016 Apr 25. PMID 27109828, Free PMC Article
    2. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    3. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_115257.6
    NM_202697.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables endopeptidase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables proteasome binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cellular response to auxin stimulus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within negative regulation of proteasomal protein catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytosol HDA PubMed 
    located_in endoplasmic reticulum IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome inhibitor-like protein
    NP_190965.1
    • proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625), PI31 proteasome regulator (InterPro:IPR013886); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 3872 Blast hits to 2739 proteins in 261 species: Archae - 2; Bacteria - 242; Metazoa - 2901; Fungi - 341; Plants - 91; Viruses - 17; Other Eukaryotes - 278 (source: NCBI BLink).
    NP_974426.1
    • proteasome inhibitor-related; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Proteasome Inhibitor PI31 (InterPro:IPR021625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      19985087..19987377
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202697.4 → NP_974426.1  proteasome inhibitor-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974426.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VD10, A0A384KYJ5, A0A5S9XLC1, F4JBP8
      Conserved Domains (1) summary
      pfam11566
      Location:14 → 156
      PI31_Prot_N; PI31 proteasome regulator N-terminal

    2. NM_115257.6 → NP_190965.1  proteasome inhibitor-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190965.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9M330
      UniProtKB/TrEMBL
      A0A178VB57, A0A5S9XLC1
      Conserved Domains (2) summary
      pfam08577
      Location:197 → 266
      PI31_Prot_C; PI31 proteasome regulator
      pfam11566
      Location:14 → 156
      PI31_Prot_N; PI31 proteasome regulator N-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M330.1

    Gene LinkOut

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