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    glycosyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825108, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glycosyltransferase family protein
    Primary source
    TAIR:AT3G59390
    Locus tag
    AT3G59390
    See related
    Araport:AT3G59390
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    12
    Sequence:
    Chromosome: 3; NC_003074.8 (21946086..21948372)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Vacuolar calcium-binding protein-like protein Neighboring gene farnesyltransferase A Neighboring gene protein GENOMES UNCOUPLED 4 Neighboring gene protein kinase family protein Neighboring gene tRNA-Thr

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_115801.4
    NM_202731.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of SREBP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glycosyltransferase family protein
    NP_191498.2
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 184 Blast hits to 184 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
    NP_974460.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2054 (InterPro:IPR019352); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      21946086..21948372
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_115801.4 → NP_191498.2  glycosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191498.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XM84, A0A7G2EW85, F4J8A2
      Conserved Domains (2) summary
      pfam10218
      Location:37 → 156
      DUF2054; Uncharacterized conserved protein (DUF2054)
      pfam15024
      Location:179 → 272
      Glyco_transf_18; Glycosyltransferase family 18

    2. NM_202731.3 → NP_974460.1  glycosyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974460.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XM84, A0A7G2EW85, F4J8A2
      Conserved Domains (2) summary
      pfam10218
      Location:37 → 156
      DUF2054; Uncharacterized conserved protein (DUF2054)
      pfam15024
      Location:179 → 272
      Glyco_transf_18; Glycosyltransferase family 18
    Nucleotide Protein
    Heading Accession and Version

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