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    MAB1 Transketolase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835157, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MAB1
    Official Full Name
    Transketolase family protein
    Primary source
    TAIR:AT5G50850
    Locus tag
    AT5G50850
    See related
    Araport:AT5G50850
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K16E14.6; MACCI-BOU
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    Genomic context

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    See MAB1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Sequence:
    Chromosome: 5; NC_003076.8 (20689243..20693470)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene nuclear polyadenylated RNA-binding protein Neighboring gene alpha-taxilin-like protein Neighboring gene Protein kinase superfamily protein Neighboring gene ubiquitin-conjugating enzyme 27 Neighboring gene alpha/beta-Hydrolases superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development. Ohbayashi I, et al. Plant Physiol, 2019 Jun. PMID 30894418, Free PMC Article
    2. Proteomic approach to identify novel mitochondrial proteins in Arabidopsis. Kruft V, et al. Plant Physiol, 2001 Dec. PMID 11743114, Free PMC Article
    3. The Extra-Pathway Interactome of the TCA Cycle: Expected and Unexpected Metabolic Interactions. Zhang Y, et al. Plant Physiol, 2018 Jul. PMID 29794018, Free PMC Article
    4. Analysis of the Arabidopsis mitochondrial proteome. Millar AH, et al. Plant Physiol, 2001 Dec. PMID 11743115, Free PMC Article
    5. The hydrophobic proteome of mitochondrial membranes from Arabidopsis cell suspensions. Brugière S, et al. Phytochemistry, 2004 Jun. PMID 15276431

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development.
      Title: Mitochondrial Pyruvate Dehydrogenase Contributes to Auxin-Regulated Organ Development.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_124463.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pyruvate dehydrogenase (acetyl-transferring) activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in acetyl-CoA biosynthetic process from pyruvate IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    NOT located_in Golgi apparatus RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleolus HDA PubMed 
    located_in plant-type vacuole HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Transketolase family protein
    NP_199898.1
    • MACCI-BOU (MAB1); FUNCTIONS IN: pyruvate dehydrogenase (acetyl-transferring) activity, catalytic activity; INVOLVED IN: defense response to bacterium; LOCATED IN: mitochondrion, nucleolus, plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: Transketolase, C-terminal (InterPro:IPR005476), Transketolase-like, C-terminal (InterPro:IPR015941), Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II (InterPro:IPR009014), Transketolase-like, pyrimidine-binding domain (InterPro:IPR005475); BEST Arabidopsis thaliana protein match is: pyruvate dehydrogenase E1 beta (TAIR:AT1G30120.1); Has 17839 Blast hits to 17830 proteins in 2804 species: Archae - 215; Bacteria - 11375; Metazoa - 619; Fungi - 227; Plants - 405; Viruses - 0; Other Eukaryotes - 4998 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20689243..20693470
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124463.4 → NP_199898.1  Transketolase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199898.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q38799, Q9LSM8
      UniProtKB/TrEMBL
      A0A178UM82, A0A5S9YDE4, A0A654GAS7
      Conserved Domains (1) summary
      PLN02683
      Location:11 → 363
      PLN02683; pyruvate dehydrogenase E1 component subunit beta
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q38799.2

    Gene LinkOut

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