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    DAR3 DA1-related protein 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836796, updated on 18-Sep-2024

    Summary

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    Official Symbol
    DAR3
    Official Full Name
    DA1-related protein 3
    Primary source
    TAIR:AT5G66640
    Locus tag
    AT5G66640
    See related
    Araport:AT5G66640
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    DA1-related protein 3; MSN2.2; MSN2_2
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    Genomic context

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    See DAR3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (26599351..26602034)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DA1-related protein 5 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene calcium uniporter (DUF607) Neighboring gene ncRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001345795.1
    NM_126062.2

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DA1-related protein 3
    NP_001190638.1
    • DA1-related protein 3 (DAR3); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1).
    NP_201465.2
    • DA1-related protein 3 (DAR3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1-related protein 6 (TAIR:AT5G66620.1); Has 235 Blast hits to 233 proteins in 45 species: Archae - 0; Bacteria - 8; Metazoa - 9; Fungi - 11; Plants - 164; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26599351..26602034
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345791.1 → NP_001331695.1  DA1-related protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BEM6

    2. NM_001345792.1 → NP_001331698.1  DA1-related protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BEN7, A0A654GEQ2

    3. NM_001345793.1 → NP_001331699.1  DA1-related protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BEN6, A0A654GEQ2, A0A7G2FJB1

    4. NM_001345794.1 → NP_001331696.1  DA1-related protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BEM9, A0A654GEQ2, A0A7G2FJB1

    5. NM_001203709.1 → NP_001190638.1  DA1-related protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190638.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654GEQ2, F4K0P2
      Conserved Domains (3) summary
      pfam10669
      Location:21 → 105
      Phage_Gp23; Protein gp23 (Bacteriophage A118)
      pfam12315
      Location:251 → 465
      DUF3633; Protein of unknown function (DUF3633)
      cl02475
      Location:114 → 153
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    6. NM_126062.2 → NP_201465.2  DA1-related protein 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201465.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVR6
      UniProtKB/TrEMBL
      A0A654GEQ2
      Conserved Domains (2) summary
      pfam12315
      Location:220 → 438
      DUF3633; Protein of unknown function (DUF3633)
      cl02475
      Location:83 → 122
      LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers

    7. NM_001345795.1 → NP_001331697.1  DA1-related protein 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVR6
      UniProtKB/TrEMBL
      A0A654GEQ2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVR6.2

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