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    myosin [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832167, updated on 18-Sep-2024

    Summary

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    Official Full Name
    myosin
    Primary source
    TAIR:AT5G20450
    Locus tag
    AT5G20450
    See related
    Araport:AT5G20450
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7C8.40; F7C8_40
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    7
    Sequence:
    Chromosome: 5; NC_003076.8 (6910486..6913323, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Mob1/phocein family protein Neighboring gene Mob1/phocein family protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene myosin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036836.3
    NM_001203420.2
    NM_001343660.1
    NM_001343661.1
    NM_001343662.1
    NM_001343666.1
    NM_001343667.1
    NM_001343668.1
    NM_122052.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myosin
    NP_001031913.1
    • CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1630 Blast hits to 1368 proteins in 340 species: Archae - 22; Bacteria - 344; Metazoa - 403; Fungi - 100; Plants - 359; Viruses - 3; Other Eukaryotes - 399 (source: NCBI BLink).
    NP_001190349.1
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: myosin, putative (TAIR:AT5G20470.1).
    NP_197545.2
    • CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast hits to 1458 proteins in 355 species: Archae - 28; Bacteria - 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses - 3; Other Eukaryotes - 412 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6910486..6913323 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343664.1 → NP_001330934.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCC0

    2. NM_001343663.1 → NP_001330935.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCA5

    3. NM_001343665.1 → NP_001330937.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCE2

    4. NM_001036836.3 → NP_001031913.1  myosin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031913.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5EAF0
      Conserved Domains (2) summary
      pfam04687
      Location:24 → 155
      Microvir_H; Microvirus H protein (pilot protein)
      cl03379
      Location:140 → 329
      Myo5-like_CBD; Cargo binding domain of myosin 5 and similar proteins

    5. NM_001203420.2 → NP_001190349.1  myosin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190349.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K5I6
      Conserved Domains (1) summary
      cl03379
      Location:118 → 307
      Myo5-like_CBD; Cargo binding domain of myosin 5 and similar proteins

    6. NM_001343668.1 → NP_001330938.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCB8

    7. NM_001343667.1 → NP_001330930.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCA8

    8. NM_001343666.1 → NP_001330936.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCA8

    9. NM_001343660.1 → NP_001330932.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCC2

    10. NM_122052.2 → NP_197545.2  myosin [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197545.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4K5I5
      Conserved Domains (2) summary
      pfam04687
      Location:31 → 162
      Microvir_H; Microvirus H protein (pilot protein)
      cl03379
      Location:147 → 336
      Myo5-like_CBD; Cargo binding domain of myosin 5 and similar proteins

    11. NM_001343662.1 → NP_001330933.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5EAF0

    12. NM_001343661.1 → NP_001330931.1  myosin [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q5EAF0
    Nucleotide Protein
    Heading Accession and Version

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