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    PERK10 proline-rich extensin-like receptor kinase 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839156, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PERK10
    Official Full Name
    proline-rich extensin-like receptor kinase 10
    Primary source
    TAIR:AT1G26150
    Locus tag
    AT1G26150
    See related
    Araport:AT1G26150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPERK10; ATPERK10; F28B23.17; F28B23_17; proline-rich extensin-like receptor kinase 10
    Summary
    Encodes a member of the proline-rich extensin-like receptor kinase (PERK) family. This family consists of 15 predicted receptor kinases (PMID: 15653807).
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    Genomic context

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    See PERK10 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Sequence:
    Chromosome: 1; NC_003070.9 (9039628..9043855, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene ncRNA Neighboring gene ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein Neighboring gene uncharacterized protein Neighboring gene Metal-dependent phosphohydrolase Neighboring gene ARM repeat superfamily protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PERK-KIPK-KCBP signalling negatively regulates root growth in Arabidopsis thaliana. Humphrey TV, et al. J Exp Bot, 2015 Jan. PMID 25262228, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001332688.1
    NM_102380.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein kinase binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    proline-rich extensin-like receptor kinase 10
    NP_173940.2
    • proline-rich extensin-like receptor kinase 10 (PERK10); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G68690.1); Has 549801 Blast hits to 257836 proteins in 6063 species: Archae - 1062; Bacteria - 108998; Metazoa - 204590; Fungi - 81234; Plants - 75274; Viruses - 10972; Other Eukaryotes - 67671 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      9039628..9043855 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102380.4 → NP_173940.2  proline-rich extensin-like receptor kinase 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173940.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9C660
      UniProtKB/TrEMBL
      A0A178WCC2
      Conserved Domains (2) summary
      smart00221
      Location:436 → 703
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:436 → 706
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. NM_001332688.1 → NP_001322403.1  proline-rich extensin-like receptor kinase 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCC2, A0A1P8ATV1
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9C660.2

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