U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Cyp2c65 cytochrome P450, family 2, subfamily c, polypeptide 65 [ Mus musculus (house mouse) ]

    Gene ID: 72303, updated on 27-Dec-2024

    Summary

    Official Symbol
    Cyp2c65provided by MGI
    Official Full Name
    cytochrome P450, family 2, subfamily c, polypeptide 65provided by MGI
    Primary source
    MGI:MGI:1919553
    See related
    Ensembl:ENSMUSG00000067231 AllianceGenome:MGI:1919553
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    2210009K14Rik
    Summary
    Predicted to enable caffeine oxidase activity; heme binding activity; and monooxygenase activity. Predicted to be involved in organic acid metabolic process and xenobiotic metabolic process. Predicted to be located in plasma membrane. Predicted to be active in cytoplasm and intracellular membrane-bounded organelle. Human ortholog(s) of this gene implicated in several diseases, including end stage renal disease; glucose metabolism disease (multiple); head and neck squamous cell carcinoma; hypertension (multiple); and warfarin resistance. Orthologous to human CYP2C8 (cytochrome P450 family 2 subfamily C member 8) and CYP2C9 (cytochrome P450 family 2 subfamily C member 9). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in duodenum adult (RPKM 72.3), small intestine adult (RPKM 34.5) and 3 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Cyp2c65 in Genome Data Viewer
    Location:
    19 C3; 19 33.7 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (39049450..39082392)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (39061006..39093948)

    Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_46106 Neighboring gene cytochrome P450, family 2, subfamily c, polypeptide 55 Neighboring gene CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_46107 Neighboring gene cytochrome P450, family 2, subfamily c, polypeptide 66 Neighboring gene STARR-seq mESC enhancer starr_46108 Neighboring gene STARR-seq mESC enhancer starr_46109 Neighboring gene cytochrome P450, family 2, subfamily c, polypeptide 53, pseudogene Neighboring gene STARR-seq mESC enhancer starr_46111

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Clone Names

    • MGC144816, MGC144817

    Gene Ontology Provided by MGI

    Process Evidence Code Pubs
    involved_in organic acid metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in xenobiotic metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in intracellular membrane-bounded organelle ISO
    Inferred from Sequence Orthology
    more info
     
    located_in plasma membrane ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    cytochrome P450, family 2, subfamily c, polypeptide 65
    Names
    cytochrome P450, 2c65
    NP_082467.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_028191.2NP_082467.2  cytochrome P450, family 2, subfamily c, polypeptide 65 precursor

      See identical proteins and their annotated locations for NP_082467.2

      Status: VALIDATED

      Source sequence(s)
      AC100729, AK008688
      Consensus CDS
      CCDS29791.1
      UniProtKB/TrEMBL
      Q148B1, Q5GLZ1
      Related
      ENSMUSP00000084489.5, ENSMUST00000087236.5
      Conserved Domains (1) summary
      pfam00067
      Location:30487
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000085.7 Reference GRCm39 C57BL/6J

      Range
      39049450..39082392
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)