nop14 NOP14 nucleolar protein homolog (yeast) [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: nop14provided by ZNC
Official Full Name: NOP14 nucleolar protein homolog (yeast)provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-9691
See related: AllianceGenome:ZFIN:ZDB-GENE-030131-9691
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cb168; nol14; c4orf9; sb:cb168; zgc:92141; Nop14-like; ik:tdsubc_1a2; xx:tdsubc_1a2
Summary: Acts upstream of or within hematopoietic stem cell differentiation. Predicted to be located in nucleolus. Predicted to be part of small-subunit processome. Is expressed in several structures, including alar plate midbrain region; digestive system; nervous system; optic vesicle; and solid lens vesicle. Orthologous to human NOP14 (NOP14 nucleolar protein). [provided by Alliance of Genome Resources, Dec 2024]
Annotation information: Annotation category: partial on reference assembly
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 21

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	21	NC_007132.7 (500368..545870)
105	previous assembly	GRCz10 (GCF_000002035.5)	21	NC_007132.6 (280366..332396)

Chromosome 21 - NC_007132.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fi03g06.x1 (e-PCR)
- UniSTS:196622

z540 (e-PCR), detects polymorphism
- UniSTS:205096

Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
acts_upstream_of_or_within hematopoietic stem cell differentiation	IMP Inferred from Mutant Phenotype more info	PubMed
involved_in maturation of SSU-rRNA	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within ribosome biogenesis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of Noc4p-Nop14p complex	IBA Inferred from Biological aspect of Ancestor more info
is_active_in nucleolus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleolus	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info
part_of small-subunit processome	IBA Inferred from Biological aspect of Ancestor more info
part_of small-subunit processome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: nucleolar protein 14

Names: probable nucleolar complex protein 14; un-named hi63; unm hi63

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.