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    linc-epb41l4a linc RNA epb41l4a [ Danio rerio (zebrafish) ]

    Gene ID: 335949, updated on 9-Dec-2024

    Summary

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    Official Symbol
    linc-epb41l4aprovided by ZNC
    Official Full Name
    linc RNA epb41l4aprovided by ZNC
    Primary source
    ZFIN:ZDB-LINCRNAG-170627-7
    See related
    AllianceGenome:ZFIN:ZDB-LINCRNAG-170627-7
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    libra; fj39c08; linc.7620; wu:fb78c05; wu:fj39c08; si:ch73-46j18.5
    Summary
    Acts upstream of or within locomotory exploration behavior. Is expressed in brain and central nervous system. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See linc-epb41l4a in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (1712656..1718402, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (1684910..1690656, complement)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene TP53 regulated inhibitor of apoptosis 1 Neighboring gene serine and arginine rich splicing factor 9 Neighboring gene galactose-3-O-sulfotransferase 1b Neighboring gene erythrocyte membrane protein band 4.1 like 4A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • linc-epb4.1l4

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within locomotory exploration behavior IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036690.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      CU459021

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      1712656..1718402 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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