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    si:dkey-7c18.24 si:dkey-7c18.24 [ Danio rerio (zebrafish) ]

    Gene ID: 562950, updated on 12-Sep-2024

    Summary

    Official Symbol
    si:dkey-7c18.24provided by ZNC
    Official Full Name
    si:dkey-7c18.24provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041014-63
    See related
    Ensembl:ENSDARG00000041433 AllianceGenome:ZFIN:ZDB-GENE-041014-63
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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    Genomic context

    See si:dkey-7c18.24 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (46040666..46043405)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (46136946..46139685)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438197 Neighboring gene uncharacterized LOC137488591 Neighboring gene si:ch211-213i16.3 Neighboring gene trace amine associated receptor 12j Neighboring gene trace amine associated receptor 12h

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    uncharacterized protein LOC562950

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001082832.1NP_001076301.1  uncharacterized protein LOC562950

      Status: PREDICTED

      Source sequence(s)
      AL929507
      UniProtKB/TrEMBL
      A0A8M1NC07, Q5QNN6
      Related
      ENSDARP00000060743.4, ENSDART00000060744.6

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      46040666..46043405
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395076.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      167854..170593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395345.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      24835..27574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)