U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    pttg1ipa PTTG1 interacting protein a [ Danio rerio (zebrafish) ]

    Gene ID: 321786, updated on 9-Dec-2024

    Summary

    Official Symbol
    pttg1ipaprovided by ZNC
    Official Full Name
    PTTG1 interacting protein aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-505
    See related
    Ensembl:ENSDARG00000090156 AllianceGenome:ZFIN:ZDB-GENE-030131-505
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fb34e07; wu:fb34e07
    Summary
    Predicted to be involved in protein import into nucleus. Predicted to be located in membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTTG1IP (PTTG1 interacting protein). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See pttg1ipa in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (11077114..11091449, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (10841687..10856022, complement)

    Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family C (CFTR/MRP), member 6a Neighboring gene small ubiquitin like modifier 3a Neighboring gene myosin X, like 1 Neighboring gene ATG9 autophagy related 9 homolog A (S. cerevisiae)

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in protein import into nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    PTTG1 interacting protein a
    Names
    pituitary tumor-transforming 1 interacting protein a

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001326362.1NP_001313291.1  PTTG1 interacting protein a precursor

      Status: VALIDATED

      Source sequence(s)
      BX548046, DT072170
      UniProtKB/TrEMBL
      A0A8M1P8W4, E7FDD4
      Related
      ENSDARP00000104922.2, ENSDART00000127209.3

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007117.7 Reference GRCz11 Primary Assembly

      Range
      11077114..11091449 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)