U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    mad1l1 mitotic arrest deficient 1 like 1 [ Danio rerio (zebrafish) ]

    Gene ID: 393886, updated on 9-Dec-2024

    Summary

    Official Symbol
    mad1l1provided by ZNC
    Official Full Name
    mitotic arrest deficient 1 like 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1081
    See related
    Ensembl:ENSDARG00000033852 AllianceGenome:ZFIN:ZDB-GENE-040426-1081
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:56571
    Summary
    Predicted to be involved in attachment of mitotic spindle microtubules to kinetochore and mitotic spindle assembly checkpoint signaling. Predicted to be located in nucleus. Predicted to be active in kinetochore; mitotic spindle; and nuclear envelope. Human ortholog(s) of this gene implicated in lymphoma; mosaic variegated aneuploidy syndrome 7 with inflammation and tumor predisposition; and prostate cancer. Orthologous to human MAD1L1 (mitotic arrest deficient 1 like 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See mad1l1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (9740800..9858521, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (9056689..9174410, complement)

    Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene extracellular leucine-rich repeat and fibronectin type III domain containing 1b Neighboring gene UDP glucuronosyltransferase 5 family, polypeptide B5 Neighboring gene UDP glucuronosyltransferase 5 family, polypeptide B4 Neighboring gene UDP glucuronosyltransferase 5 family, polypeptide B3 Neighboring gene UDP glucuronosyltransferase 5 family, polypeptide B2 Neighboring gene UDP glucuronosyltransferase 5 family, polypeptide B1 Neighboring gene phosphomannomutase 2 Neighboring gene integrator complex subunit 15

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Clone Names

    • MGC56571

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in attachment of mitotic spindle microtubules to kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in mitotic spindle assembly checkpoint signaling IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within mitotic spindle assembly checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in mitotic spindle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nuclear envelope IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    mitotic spindle assembly checkpoint protein MAD1
    Names
    MAD1 mitotic arrest deficient-like 1
    mitotic arrest deficient-like protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200912.2NP_957206.2  mitotic spindle assembly checkpoint protein MAD1

      See identical proteins and their annotated locations for NP_957206.2

      Status: VALIDATED

      Source sequence(s)
      BX649473, BX927386
      UniProtKB/TrEMBL
      A0A8M1PF90, D9IWE2
      Related
      ENSDARP00000123048.1, ENSDART00000147904.3
      Conserved Domains (2) summary
      pfam01496
      Location:41140
      V_ATPase_I; V-type ATPase 116kDa subunit family
      pfam05557
      Location:53715
      MAD; Mitotic checkpoint protein

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007112.7 Reference GRCz11 Primary Assembly

      Range
      9740800..9858521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)