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    si:ch211-248a14.8 si:ch211-248a14.8 [ Danio rerio (zebrafish) ]

    Gene ID: 100001321, updated on 9-Dec-2024

    Summary

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    Official Symbol
    si:ch211-248a14.8provided by ZNC
    Official Full Name
    si:ch211-248a14.8provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-131126-33
    See related
    Ensembl:ENSDARG00000097693 AllianceGenome:ZFIN:ZDB-GENE-131126-33
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be located in membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See si:ch211-248a14.8 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (20173830..20184109)
    105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (20154003..20164201)

    Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene actinin, alpha 2b Neighboring gene prolyl 4-hydroxylase, alpha polypeptide I b Neighboring gene ecdysoneless homolog (Drosophila) Neighboring gene gonadotropin-releasing hormone 3 Neighboring gene O-6-methylguanine-DNA methyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    solute carrier family 35 member D3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007128.7 Reference GRCz11 Primary Assembly

      Range
      20173830..20184109
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009292981.4 → XP_009291256.1  solute carrier family 35 member D3 isoform X1

      UniProtKB/TrEMBL
      A0A8M3AU55

    2. XM_068214575.1 → XP_068070676.1  solute carrier family 35 member D3 isoform X2

    3. XM_001341307.9 → XP_001341343.4  solute carrier family 35 member D3 isoform X3

      UniProtKB/TrEMBL
      A0A8M1Q1Z0, X1WDL4
      Related
      ENSDARP00000128313.1, ENSDART00000155379.3

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394981.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      149028..159686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021473093.2 → XP_021328768.1  solute carrier family 35 member D3 isoform X3

      UniProtKB/TrEMBL
      A0A8M9PNZ4

    2. XM_021473094.2 → XP_021328769.1  solute carrier family 35 member D3 isoform X4

      UniProtKB/TrEMBL
      A0A8M9PV99
    Nucleotide Protein Strain
    Heading Accession and Version

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